Pairwise Alignments

Query, 832 a.a., ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 847 a.a., ABC transporter, permease protein, putative from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  787 bits (2032), Expect = 0.0
 Identities = 420/823 (51%), Positives = 549/823 (66%), Gaps = 2/823 (0%)

Query: 11  RDWRTGELRFLLIALIVAVASLSSVGFFVDRMRAGMTRDAHQLLGADLLVAADQPLPPQW 70
           RDWR GELR L++A+ +AVA+L++VGFF DR++ G+TRDA  L+G D +V++D   PP +
Sbjct: 22  RDWRAGELRLLMLAVTLAVAALTAVGFFADRLQGGLTRDASALIGGDAVVSSDHQPPPSF 81

Query: 71  MQRAAAQGLQQAQTQVFPSMAQAGEGDAARAVLASIKAVTAGYPLRGQLRLQTASGA-DR 129
             RA   GL   QT  FP+M +A + +   A L ++KAV  GYPLRG LR+  A G  D 
Sbjct: 82  EARARELGLTTTQTLGFPTMGRARDEEGGAARLVALKAVGEGYPLRGTLRVAEAQGGPDS 141

Query: 130 PAEGIPQPGTVWVDPQILSQLDVRVGDTLKLGDLPLKIAAVIAVEPDRGSAFVNFAPRVM 189
               IP PGTVWVD  +L+ LD+++G  L LGD   +IA +I VEPDRG  F++FAPRVM
Sbjct: 142 ATREIPAPGTVWVDEALLAALDLKMGQALLLGDATFRIARLIVVEPDRGGGFMSFAPRVM 201

Query: 190 LGEADLAATHLVQVGSRVTYRLLLAGPAPVVKQFQQELERQIEADKLRGVRLESLENGRP 249
           L  ADL AT LVQ  SR+TYRL + G    V  F     + IE   +RG+RLESLE GRP
Sbjct: 202 LNAADLPATGLVQPASRLTYRLAVIGNEARVADFSDWATKAIEQPDVRGMRLESLEGGRP 261

Query: 250 EMRATLDRAEQFLSLVGLLSAMLAALAVAMAARRFMLRHLDACAMLRCFGLTQAQVTRLY 309
           EM+ TL RAE+FL+LV LL+A+L A+AVA+AAR F  RHLD CAMLR  GL+Q  + R Y
Sbjct: 262 EMQQTLGRAEKFLNLVALLAALLCAVAVAIAARGFAQRHLDDCAMLRVLGLSQGTMARAY 321

Query: 310 LGEFMLVGLAASVLGMLIGYAAHFALLQWLGNFMPTALPPAGWQPAVQGVAAGLLLLLGF 369
             EF L+GL AS LG+ IGYA H A +  L   +  +LP     P + G+  GL L++ F
Sbjct: 322 TLEFALIGLFASALGVAIGYAVHHAFVLLLAGLVEASLPAPSLTPVLLGLGMGLTLMMAF 381

Query: 370 ALPPILQLRNVPHNRVIRRDQLTPQPLTVATYGLGTLVFSGLLLWQAGDLKLGLLTIAGF 429
            LPP+LQL  VP  RVIRRD    +P T+A  GLG   F+ LLL  + DL LG + + GF
Sbjct: 382 GLPPVLQLAQVPPLRVIRRDVGQLKPATLAVLGLGVAGFAALLLAASRDLLLGAIAVGGF 441

Query: 430 LGGFGLFALVAWLCLRALR-SLRGLVDRQSWRFAIDGLQRRPAAAVMQVVALGLGLMALL 488
            G   LFA  ++  +R LR S+      ++   A   L  RPA AV+Q+ AL +GL+AL+
Sbjct: 442 AGAVLLFAAASYAAVRVLRASVNEATAPRALVMATRQLSARPAFAVVQISALAVGLLALV 501

Query: 489 LLTVIRGDLVGAWRQATPADAPNRFIINIQPDQRQAVEQLLRQGGVGDVALYPMIRGRLV 548
           LL ++R DL+ +WR ATP DAPNRF+IN+QP+Q +A +Q LRQGGV     YPMIRGRLV
Sbjct: 502 LLVLLRTDLISSWRSATPPDAPNRFVINVQPEQGEAFQQALRQGGVQRFDWYPMIRGRLV 561

Query: 549 QINGRAISAADYAEDRAKRLVDREFNLSTLREIPPGNGIVAGRWYDDRQPEASVERGLAQ 608
            ING+ ++ +D+ EDRA+RLVDREFNLS    +P  N +VAGRW ++ +   SVE GLA+
Sbjct: 562 TINGKTVAPSDFTEDRAQRLVDREFNLSNTATLPAHNPVVAGRWTENERDALSVEEGLAE 621

Query: 609 TLGIKLGDRLQFDIAGQLVEAPVTSLRKLEWGSLRVNFFVILNPTLMRDTPQSWITAVHL 668
            LG+KLGDRL FDIAGQ+ E  +TSLRK++WGS+RVNFFV+     + D P S+I+A   
Sbjct: 622 ELGLKLGDRLGFDIAGQITEGRITSLRKVDWGSMRVNFFVVFPVAQVPDVPLSYISAFRA 681

Query: 669 NPQQEALGNTLTRDYPNLTVVDIGSVLRQIQDVVGQVISAVEFLFLFTLCSGVLVLYAAL 728
                   N L R +PN+T VD+   + Q+Q V+GQVISAVEFLF FTL +G++VL +A+
Sbjct: 682 PEPTNGFDNALVRQFPNITNVDMSQTIAQVQRVLGQVISAVEFLFAFTLAAGLVVLLSAV 741

Query: 729 AGSQDERVREAGLLRALGATRVELARAQRIEVLLVGALAGLLAASGAAAIGWALAHYVFN 788
             ++ ER RE  +LRA+GA    L + QRIE+L VG LAG LA++ A A+GWALA +VF 
Sbjct: 742 TATRGEREREFAILRAVGAGSGLLRQVQRIELLGVGLLAGFLASAVAVAVGWALARFVFQ 801

Query: 789 FDWSFSPLVWLAGMSLGAACSALGGWAGLRHVLRRPPLQTLRE 831
           F W+ SP V L G   GA  + L GW GLR VLR P ++TLR+
Sbjct: 802 FSWTASPWVPLGGAVAGALLALLAGWWGLRSVLRTPVVETLRK 844