Pairwise Alignments

Query, 832 a.a., ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 804 a.a., FIG00809136: hypothetical protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  389 bits (999), Expect = e-112
 Identities = 269/824 (32%), Positives = 419/824 (50%), Gaps = 48/824 (5%)

Query: 7   RMTWRDWRTGELRFLLIALIVAVASLSSVGFFVDRMRAGMTRDAHQLLGADLLVAADQPL 66
           R  WR+WR+  L  + +AL +AVA + ++G   DRM  G+++ + + +  D  + + + +
Sbjct: 4   RWFWREWRSPSLIIVWLALSLAVACVLALGSISDRMEKGLSQQSREFMAGDRTLQSSREV 63

Query: 67  PPQWMQRAAAQGLQQAQTQVFPSMAQAGEGDAARAVLASIKAVTAGYPLRGQLRLQTASG 126
           P  W++ A  +GL   +   F +M  AG+       LAS+KAV + YP+ G+L+      
Sbjct: 64  PKAWLEEARKRGLNVGEQLTFATMTFAGDTPQ----LASVKAVDSVYPMYGELQT----- 114

Query: 127 ADRPAEGIPQPGTVWVDPQILSQLDVRVGDTLKLGDLPLKIAAVIAVEPDRGSAFVNFAP 186
             RP     QPG+V + P++++ L+++ GDT+ +GD+ L+IA  +  EPD G      AP
Sbjct: 115 --RPGGVKAQPGSVLLAPRLMALLNLKTGDTIDVGDVTLRIAGEVVQEPDSGFNPFQMAP 172

Query: 187 RVMLGEADLAATHLVQVGSRVTYRLLLAGPAPVVKQFQQELERQIEADKLRGVRLESLEN 246
           R+M+  AD+A T  +Q GSRV +R    G    +  ++  L  Q++ +     R   LE 
Sbjct: 173 RLMMNMADVAKTGAIQPGSRVMWRYKFGGTPQQLAGYESWLLPQLKPEH----RWYGLEQ 228

Query: 247 GRPEMRATLDRAEQFLSLVGLLSAMLAALAVAMAARRFMLRHLDACAMLRCFGLTQAQVT 306
               +  +L+R++QFL L  LL+ +LA  AVA+A   +     D  A+L+  G  +AQ+ 
Sbjct: 229 DDGALGKSLERSQQFLLLSALLTLLLAVAAVAVAMSHYCRSRYDLVAILKTLGAGRAQLR 288

Query: 307 RLYLGEFMLVGLAASVLGMLIGYAAHFALLQWLGNFMPTALPPAGWQPAVQGVAAGLLLL 366
           +L +G++++V   ++V G  IG      LL  L   +P  LPPA   P +  + A  ++ 
Sbjct: 289 KLIIGQWLMVLGLSAVTGGAIGLLFENILLVLLKPVLPADLPPASLWPWLWALGAMTVIS 348

Query: 367 LGFALPPILQLRNVPHNRVIRRDQLT---------PQPLTVATYGLGTLVFSGLLLWQ-- 415
           L   L P   L      RV+RRD +          P    V    L  L+   +LLW   
Sbjct: 349 LLVGLRPYRLLLATQPLRVLRRDVVARVWPLKIYLPVACAVVVALLVGLMGGSMLLWAVL 408

Query: 416 AGDLKLGLLTIAGFLGGFGLFALVAWLCLRALRSLRGLVDRQSWRFAIDGLQRRPAAAVM 475
           AG + L LL             LV W+ L  LR +   +     R A+  L R+P + + 
Sbjct: 409 AGAVILALLC-----------GLVGWMLLNVLRGMT--LTSLPLRLAVSRLLRQPWSTLS 455

Query: 476 QVVALGLGLMALLLLTVIRGDLVGAWRQATPADAPNRFIINIQPDQRQAVEQLLRQGGVG 535
           Q+ A  L  M L LL V+RGDL+  W+Q  P ++PN F+INI  +Q   ++  L +  V 
Sbjct: 456 QLSAFSLSFMLLALLLVLRGDLLDRWQQQLPPESPNYFLINIASEQVAPLKAFLAEHQVI 515

Query: 536 DVALYPMIRGRLVQINGRAISAADYAEDRAKRLVDREFNLSTLREIPPGNGIVAGRWYDD 595
               YP++R RL +ING         E +    ++RE NL+     P  N +VAG W   
Sbjct: 516 PQTFYPIVRARLTKINGNP------TEGQQDESLNRELNLTWQDTRPAHNPLVAGHW-PP 568

Query: 596 RQPEASVERGLAQTLGIKLGDRLQFDIAGQLVEAPVTSLRKLEWGSLRVNFFVILNPTLM 655
           +  E S+E GLA+ L +KLGD + F    Q   A VTSLR+++W SLR NFF I     +
Sbjct: 569 KPGEVSMEEGLAKRLNVKLGDSVTFMGDTQAFSAKVTSLRQVDWESLRPNFFFIFPSGAL 628

Query: 656 RDTPQSWITAVHLNPQQEALGNTLTRDYPNLTVVDIGSVLRQIQDVVGQVISAVEFLFLF 715
              PQSW+T+         L   L R++P ++++DIG++L+Q+  V+ QV  A+E + + 
Sbjct: 629 DGQPQSWLTSFRWENGNGML-TQLNREFPTVSLLDIGAILKQVGQVLEQVSRALEVMVVL 687

Query: 716 TLCSGVLVLYAALAGSQDERVREAGLLRALGATRVELARAQRIEVLLVGALAGLLAASGA 775
               G+L+L A +     +R +E  + R LGA +  L      E  ++G +AGL+AA GA
Sbjct: 688 VTLCGMLLLLAQVQVGMRQRHQELVVWRTLGAGKKLLRTTLWCEFAMLGLVAGLVAAIGA 747

Query: 776 AAIGWALAHYVFNFDWSFSPLVWLAGMSLGA-ACSALGGWAGLR 818
                 L   VF+F W     +W A    GA   S  GGW G+R
Sbjct: 748 ETALAILQINVFDFPWEPDWRLWGALPFCGALLLSVCGGWLGVR 791