Pairwise Alignments

Query, 356 a.a., NADH:ubiquinone oxidoreductase subunit H from Herbaspirillum seropedicae SmR1

Subject, 325 a.a., NADH:ubiquinone oxidoreductase, membrane subunit H from Escherichia coli BL21

 Score =  296 bits (758), Expect = 5e-85
 Identities = 145/332 (43%), Positives = 218/332 (65%), Gaps = 16/332 (4%)

Query: 14  AYLGPTLFTLVWTLVKILVVMVPLLVCVAYMTYWERKLIGWMHVRLGPNRVGPAGLLQPI 73
           +++ P L  ++ T++K +V+++ ++ C A+M++ ER+L+G    R GPNRVG  G LQ +
Sbjct: 2   SWISPELIEILLTILKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLV 61

Query: 74  ADAVKLIFKEISTPSKANKALFYLAPVMTIMPALAAWAVVPFSPEHVLANVNAGLLYLMA 133
           AD +K+ FKE   P  +++ +F LAP++     L A+A+VP SP  V+A++N G+L+ + 
Sbjct: 62  ADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFLM 121

Query: 134 ITSMEVYGIIIAGWASNSKYAFLGAMRASAQMVSYEISMGFCLVVVLMVSGSLNMTDIVM 193
           +  + VY ++ AGW+SN+KY+ LGAMRASAQ +SYE+ +G  L+ V+  +GS NMTDIV 
Sbjct: 122 MAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGVVAQAGSFNMTDIV- 180

Query: 194 GQTQGHFASMGLNFLSWNWLPLLPIFVIYFVSGVAETNRHPFDVVEGESEIVAGHMIEYS 253
             +Q H          WN +P    F+ + ++GVA  +RHPFD  E E E+  G+ IEYS
Sbjct: 181 -NSQAHV---------WNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYS 230

Query: 254 GMSFAMFFLAEYAAMILISILTALLFFGGWSAPVSALDFIPGWIWLGLKTFFFLSLYVWI 313
           GM F +FF+ EY  ++ IS L   LFFGGW  P+     +P +IW  LKT FF+ +++ I
Sbjct: 231 GMKFGLFFVGEYIGIVTISALMVTLFFGGWQGPL-----LPPFIWFALKTAFFMMMFILI 285

Query: 314 RASFPRYRYDQIMRLGWKVFIPLTLVWLVVVA 345
           RAS PR RYDQ+M  GWK+ +PLTL+ L+V A
Sbjct: 286 RASLPRPRYDQVMSFGWKICLPLTLINLLVTA 317