Pairwise Alignments

Query, 158 a.a., NADH dehydrogenase subunit B from Herbaspirillum seropedicae SmR1

Subject, 220 a.a., NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  164 bits (415), Expect = 9e-46
 Identities = 78/149 (52%), Positives = 104/149 (69%), Gaps = 2/149 (1%)

Query: 3   IEGVLNEGFVTTSLDKVINWTRTGSLWPMTFGLACCAVEMMHVGASRYDLDRFGA-VFRP 61
           +E  +N+      L  ++NW R  S+WP  FGL+CC VEM+    + +D+ RFGA V R 
Sbjct: 29  LEQEVNKNVFMGKLHDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRA 88

Query: 62  SPRQSDLMIVAGTLCNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDR 121
           SPRQ+DLM+VAGT   KMAP ++++YDQM EP+WVISMG+CAN GG Y   YSVV+G D+
Sbjct: 89  SPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDI-YSVVQGVDK 147

Query: 122 IVPVDVYVPGCPPTAEALLYGVIQLQNKI 150
            +PVDVY+PGCPP  EA +  ++ LQ  I
Sbjct: 148 FIPVDVYIPGCPPRPEAYMQALMLLQESI 176