Pairwise Alignments

Query, 240 a.a., pseudouridine synthase from Herbaspirillum seropedicae SmR1

Subject, 381 a.a., pseudouridine synthase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 94.0 bits (232), Expect = 4e-24
 Identities = 69/235 (29%), Positives = 116/235 (49%), Gaps = 11/235 (4%)

Query: 2   AKLTLDRILQSQGFGSRKYCRELIEDGEVVINGEVVDD--YRATPDTKDLVLTIFEEEWE 59
           +++ L++ + + G  SR+   +LIE GEV +NGEV+ +  YR     K     +++ +  
Sbjct: 146 SEIRLNKYIANAGICSRRDADKLIEKGEVKVNGEVITELGYRVLLTDK----VVYKGKLI 201

Query: 60  YREH-VYIAINKPPN-IECSRKPSHHPGVLTLLPEQFTWRDVQPVGRLDHDTTGLLLMSD 117
             E  VY+ +NKP + I  +  P +   V+ L+      R + PVGRLD +TTGLLL ++
Sbjct: 202 NPEKPVYVLLNKPKDFITTTDDPMNRKTVMHLVSSACEER-IFPVGRLDRNTTGLLLFTN 260

Query: 118 DGAFIHAQSSPKRHVPKVYAATTAEPVTEALIAQLKAGVQLHDEPAPLAATRCRQLGENL 177
           DG      S P   V K+Y  T   P+T+    ++  G+ L D    +   +       +
Sbjct: 261 DGELAAKLSHPAEKVRKIYQVTLDSPITKTHFEEIAEGLTLEDGLVNVDDIQILSKDRTI 320

Query: 178 LEIVLEQGKYHQVKRMLAAAGNHCSALQRTAIGGLQLEALALEEGEWTYLDAEQM 232
           L + +  GK   V+R+ A  G    AL R    GL  + L+   G+W +L  +++
Sbjct: 321 LGLEIHVGKNRIVRRIFAHLGYEVVALDRVTYAGLTKKDLS--RGKWRFLTEKEV 373