Pairwise Alignments

Query, 837 a.a., chemotaxis protein CheA from Herbaspirillum seropedicae SmR1

Subject, 735 a.a., chemotaxis protein CheA from Pseudomonas simiae WCS417

 Score =  341 bits (874), Expect = 1e-97
 Identities = 246/838 (29%), Positives = 420/838 (50%), Gaps = 124/838 (14%)

Query: 3   LLRDQFILETRDLLQGISEKLMQLEDAPEHVELLESLFRMVHTLKGNSGLFDVPEMTRVL 62
           +L+D F++E  ++L+ +SE+L++LE  P+   LL ++FR  HT+KG +G   + E+    
Sbjct: 9   ILQD-FLVEAGEILEQLSEQLVELESRPDDANLLNAIFRGFHTVKGGAGFLQLHELVECC 67

Query: 63  HACEDLMDAVRRRQVAYSEVLADRLLDAMDFVAMLCDGLEMEAEQADPHAQEAVQIASSL 122
           H  E++ D +R+ +      L D +L+A+D V    +G+  E  +  P       I ++ 
Sbjct: 68  HIAENVFDILRKGERHVDSELMDVILEALDAV----NGMFSEVRERAP-------ITAAT 116

Query: 123 RQLIGEHAGVESAVGDLARIGDAQDRGAAIVAAPAAGQALPLRAIPEPLRRQAFAQAQAG 182
            +L+            LAR  +  D  AA VA           A PEP+       A+A 
Sbjct: 117 PELLAA----------LARYAEPADLSAAPVA----------EAAPEPV-------AEAE 149

Query: 183 GELHWIAYRPSRECFFQGDDPFHRAREVPGFIWGRIEAPAAWPPLAELNAYDCVLHFQIV 242
            ++               D  F +       +    EAPAA                  V
Sbjct: 150 PDVT--------------DSEFEQLLNSLSAVKAEAEAPAA-----------------AV 178

Query: 243 AAASQAELMEY-FRYVPDQVE-LTQLAAQWLAPAPESAERAS--AGAHAEPAQDPIDAVM 298
           AA +  ++ +  F  + DQ+    Q AA  + PA  S   A+  A A+ +   D  +A++
Sbjct: 179 AAPTSEDITDAEFESLLDQLHGKGQFAADAVTPAAVSEAPAAPTANANTDITDDEFEALL 238

Query: 299 AEIFAIQRQILQSEANMGWQDGRTQAVASTLMNCCRSIGNLELIGELEIARQQSLQLRSC 358
            ++      +  +   +        A A+       +     LI + E            
Sbjct: 239 DQLHGKGTFVADALPEVA-------ATAAAPAAASAAPAGDGLISDHEF----------- 280

Query: 359 DPLLAWLNANPLPLQRGPVASVASVASAEAGAEAAEAVAVEVRQESLPQPEALSRQEPPQ 418
           + LL  L+      +  P A+VA+ A   A A A             P P A    +P  
Sbjct: 281 ESLLDELHGKGKFSEVAPAATVATAAPVAAKAAAPA-----------PAPAA----KPAP 325

Query: 419 VQPPAPPLRESLPEESGRAGRRAEESLSGNKSVKVEQVKIDRLMNLIGEMVVSKNALPYL 478
              PAP    + P     A + A E+     +V+V+  ++D +MN++GE+V+ +N L  L
Sbjct: 326 AAAPAPARAAAAPV----ADKPASEA---ETTVRVDTARLDDIMNMVGELVLVRNRLVRL 378

Query: 479 AQRAEDQFGVRELAREIKAQYAVINRIAEEMQDAIMQVRMMPVSVVFQRFPRLVRDISRK 538
              + D+   + ++         ++ +  ++Q A+M+ RM P+  VF RFPRLVRD++R+
Sbjct: 379 GLSSGDEAMQKAVSN--------LDVVTADLQTAVMKTRMQPIKKVFGRFPRLVRDLARQ 430

Query: 539 LGKEVQLVLVGEETEADKNIIEALADPLIHIVRNSLDHGLEGPEQRRASGKPALGSLTIS 598
           L KE+ L LVGEET+ DKN++EALADPL+H+VRN++DHG+E PE+R ASGK   G + ++
Sbjct: 431 LKKEINLELVGEETDLDKNLVEALADPLVHLVRNAVDHGVETPEEREASGKSRNGKVILA 490

Query: 599 AAHEGDQVVIVIEDDGKGIDPALIKRKAYEKGLIDEAQLERISDQDAVNLVFSSGFSTAE 658
           A  EGD +++ I DDGKG+DPA+++  A ++G++D+   +R++D +  NL+F+ GFST  
Sbjct: 491 AEQEGDHILLSITDDGKGMDPAILRNIAVKRGVMDKDAADRLTDSECYNLIFAPGFSTKT 550

Query: 659 VVSDLSGRGVGMDVVRNAVEKVNGSLALHSVSGKGTRLQISLPLSMAVTKVMIIESDGQL 718
            +SD+SGRGVGMDVV+  + ++NGS+ ++S  G+G+++ I +PL++A+   +++    Q 
Sbjct: 551 EISDVSGRGVGMDVVKTKISQLNGSINIYSTKGQGSKIVIKVPLTLAIMPTLMVMLGNQA 610

Query: 719 FGVPMEHVMETVRVPRSSLHFANSSAKMVLRGHILGLKGINQILGIAAEQKTNADGEVAV 778
           F  P+ +V E   +  S  +  +    +++R   L L  + + L  +A+ +   +G V +
Sbjct: 611 FAFPLVNVNEIFHLDLSRTNVVDGQEVVIVRDKALPLFYLKRWLVASAKHEEQREGHVVI 670

Query: 779 LVVRVGGQSVGLVIDDFRETVDVIQKPLLGILGGLSLYSGSALMGDGSVLMVLNTREM 836
           L   VG Q +G V+D      +V+ KPL  +L G    SG+ + GDG + ++L+   M
Sbjct: 671 L--SVGTQRIGFVVDQLVGQEEVVIKPLGKMLQGTPGMSGATITGDGRIALILDVPSM 726