Pairwise Alignments

Query, 837 a.a., chemotaxis protein CheA from Herbaspirillum seropedicae SmR1

Subject, 669 a.a., Signal transduction histidine kinase CheA (EC 2.7.3.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  271 bits (692), Expect = 1e-76
 Identities = 171/517 (33%), Positives = 285/517 (55%), Gaps = 38/517 (7%)

Query: 340 ELIGELEIARQQSLQLRSCDPLLAWLNANPLPLQRGPVASVASVASAEAGAEAAEAV--- 396
           E + E E  R +S +LR    +L+ L AN + L    + ++A++     GA++  A    
Sbjct: 149 ESVAETESPRDES-KLRI---VLSRLKANEVDLLEEELGNLATLTDVVKGADSLSATLDG 204

Query: 397 ----------------AVEVRQESLPQPEALSRQEPPQVQPPAPPLRESLPEESG----R 436
                           A ++  E +        QE  +V P APP   +   +S      
Sbjct: 205 SVAEDDIVAVLCFVIEADQIAFEKVVAAPVEKAQEKTEVAPVAPPAVVAPAAKSAAHEHH 264

Query: 437 AGRRAEESLSGNKSVKVEQVKIDRLMNLIGEMVVSKNALPYLAQRAEDQFGVRELAREIK 496
           AGR        + S++V   K+D+L+NL+GE+V++++ L   AQR+ +   V     ++ 
Sbjct: 265 AGREKPARERESTSIRVAVEKVDQLINLVGELVITQSML---AQRSNELDPVNH--GDLI 319

Query: 497 AQYAVINRIAEEMQDAIMQVRMMPVSVVFQRFPRLVRDISRKLGKEVQLVLVGEETEADK 556
                + R A ++Q+++M +RMMP+  VF RFPRLVRD++ KLGK+V+L LVG  TE DK
Sbjct: 320 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRFPRLVRDLAGKLGKQVELTLVGSSTELDK 379

Query: 557 NIIEALADPLIHIVRNSLDHGLEGPEQRRASGKPALGSLTISAAHEGDQVVIVIEDDGKG 616
           ++IE + DPL H+VRNSLDHG+E PE+R  +GK  +G+L +SA H+G  + I + DDG G
Sbjct: 380 SLIERIIDPLTHLVRNSLDHGIEMPEKRLEAGKNVVGNLILSAEHQGGNICIEVTDDGAG 439

Query: 617 IDPALIKRKAYEKGLIDEAQLERISDQDAVNLVFSSGFSTAEVVSDLSGRGVGMDVVRNA 676
           ++   I  KA  +G+   A  E ++D +   L+F+ GFSTAE V+D+SGRGVGMDVV+  
Sbjct: 440 LNRERILAKAMSQGM---AVNENMTDDEVGMLIFAPGFSTAEQVTDVSGRGVGMDVVKRN 496

Query: 677 VEKVNGSLALHSVSGKGTRLQISLPLSMAVTKVMIIESDGQLFGVPMEHVMETVRVPRSS 736
           ++++ G + + S  G GT ++I LPL++A+   M +   G++F +P+  VME+++     
Sbjct: 497 IQEMGGHVEIQSKQGSGTTIRILLPLTLAILDGMSVRVAGEVFILPLNAVMESLQPREED 556

Query: 737 LH-FANSSAKMVLRGHILGLKGINQILGIAAEQKTNADGEVAVLVVRVGGQSVGLVIDDF 795
           LH  A     + +RG  L L  + ++  +   +     G   V++++  G+   L++D  
Sbjct: 557 LHPLAGGERVLEVRGEYLPLVELWKVFDVDGAKTEATQG--IVVILQSAGRRYALLVDQL 614

Query: 796 RETVDVIQKPLLGILGGLSLYSGSALMGDGSVLMVLN 832
                V+ K L      +   S + ++GDGSV ++++
Sbjct: 615 IGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVD 651



 Score = 53.9 bits (128), Expect = 3e-11
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 5/151 (3%)

Query: 8   FILETRDLLQGISEKLMQLEDAPEHVELLESLFRMVHTLKGNSGLFDVPEMTRVLHACED 67
           F  E  +LL  + + L+ L       E L ++FR  H++KG +G F    +    H  E+
Sbjct: 10  FFDEADELLADMEQHLLDLVPESPDAEQLNAIFRAAHSIKGGAGTFGFTILQETTHLMEN 69

Query: 68  LMDAVRRRQVAYSEVLADRLLDAMDFVAMLCDGLEMEAEQADPHAQEAVQIASSLRQLIG 127
           L+D  RR ++  +  + +  L+  D   ++ + L+      +P A     I ++LRQL  
Sbjct: 70  LLDEARRGEMQLNTDIINLFLETKD---IMQEQLDAYKNSEEPDAASFEYICNALRQLAL 126

Query: 128 EHAG-VESAVGDLARIGDA-QDRGAAIVAAP 156
           E  G    AV + A +  A Q+   A   +P
Sbjct: 127 EAKGETTPAVVETAALSAAIQEESVAETESP 157