Pairwise Alignments

Query, 775 a.a., anaerobic (selenocysteine-containing) formate dehydrogenase from Herbaspirillum seropedicae SmR1

Subject, 782 a.a., Protein YdeP from Pseudomonas lactucae CFBP13502

 Score =  877 bits (2267), Expect = 0.0
 Identities = 435/765 (56%), Positives = 546/765 (71%), Gaps = 5/765 (0%)

Query: 5   PRIEQYNQPAGGWGALKYVALNLVKEHVADGRGLRTLLSQNQPDGFDCPGCAWPDREHTS 64
           PR + Y  PAGGWGAL  VA   +    A  + LR +L  NQ  GFDCPGCAW D   + 
Sbjct: 13  PRYKPYKGPAGGWGALISVAQAWLTSDNAL-KNLRMMLKTNQNGGFDCPGCAWGDSPESG 71

Query: 65  TFEFCENGVKAVAAEATKKRVTPEFFAQHTVTELMQQSDFELEEHGRLTHPMVYDAATDK 124
             +FCENG KAV  EATK+RV   FFA+H+VT L++QSD+ LE  GRLT PM YDA TD+
Sbjct: 72  MVKFCENGAKAVNWEATKRRVDAAFFAKHSVTALLEQSDYWLEYQGRLTEPMRYDAETDR 131

Query: 125 YKKIEWADAFALMAKHLNALPDPDMADFYVSGRASNEAAFLFQLFVRQYGTNNFPDCSNM 184
           Y  + W  AF L+ KHLNALP PDMA+FY SGRASNEAA+L+QL VR YGTNNFPDCSNM
Sbjct: 132 YTPVSWEAAFDLIGKHLNALPSPDMAEFYTSGRASNEAAYLYQLLVRAYGTNNFPDCSNM 191

Query: 185 CHEPTSVGLPGTVGIGKGTVLLEDFDHCDTLLLFGQNPATNHPRMMGELRHASKRGATIV 244
           CHE + V L  +VG+GKGTV  +DF+H D + ++GQNP TNHPRM+  LR A KRGA +V
Sbjct: 192 CHEASGVALAQSVGVGKGTVTFDDFEHADAIFVWGQNPGTNHPRMLEPLREAVKRGAQVV 251

Query: 245 AINPLKERGLERFADPQSKVEMLTMGSTRISSMFIHPTLGGDLALIKGVIKRTIELDDAA 304
            INPLKERGLERF  PQ  +EMLT G    ++ +  P LGGD+A+++G+ K  +  +  A
Sbjct: 252 CINPLKERGLERFQHPQHPLEMLTNGDKPTNTAYFRPALGGDMAILRGMAKFLLLWERQA 311

Query: 305 RAAGAERVIDVKFIEEHTAGFEEFAAQARAESWDDIVAESGVSREDIEKLAQVYVKGKAV 364
           +A G E V D  F+ EHTA   ++ A+    SWD+IV +SG+    IE+ A++Y KGK V
Sbjct: 312 QAEGKEAVFDHDFLNEHTANVLDYLARIDDTSWDEIVEQSGLPLVQIEQAARMYAKGKNV 371

Query: 365 IATWGMGLTQHKHAVATIQLLSNMMMLRGNIGRQGAGLCPVRGHSNVQGDRTVGIDEKPT 424
           I  W MG+TQH+H+V TIQ L+N+M+LRGNIGR GAGLCPVRGHSNVQGDRT+GI+E+P 
Sbjct: 372 IMCWAMGITQHRHSVPTIQELANLMLLRGNIGRPGAGLCPVRGHSNVQGDRTMGINERPP 431

Query: 425 PAFLDRLEQVFGFKAPRHHGNDTVGSVMAMLEGRTKVFIGLGGNFAMATPDTPRTFEAMR 484
            AFLD LE+ F F+ PR +G++ V ++ AMLEGR+KVFIGLGGNFA ATPD+ RTFEA+R
Sbjct: 432 VAFLDSLERRFQFRVPRTNGHNVVEAIHAMLEGRSKVFIGLGGNFAQATPDSTRTFEALR 491

Query: 485 SCNLTVHITTKLNRSHLVHGKDALILPTMGRTEIDMQKSGPQGVTVEDSMSMVHVSYGIN 544
           +C+LTV I+TKLNRSHL HGKDALILP +GRT+ID+Q  GPQ VTVEDS SMVH S G  
Sbjct: 492 NCDLTVQISTKLNRSHLTHGKDALILPCLGRTDIDIQAEGPQAVTVEDSFSMVHASNGQL 551

Query: 545 KPASEHLMSETAIVAHLAEATMKSRNNGPKIDWLWYAEDYSRIRDAIEQVYDAFKGYNER 604
           +P S+ + SE AI+A +A AT+ S+     +DW W   DY RIRD I      FK +NE+
Sbjct: 552 QPLSKLMKSEPAILAGIAAATLGSK----PVDWNWLVADYGRIRDLIADTIPGFKDFNEK 607

Query: 605 IANPGGFHLGVASRDRVWKTASGKANFIVHDIPKDTPIHRARAIHGEKLLTLMTTRSHDQ 664
           I +PGGF+LG ++  R W T SG+ANF  + +PKD    R  A      L + + RSHDQ
Sbjct: 608 IKHPGGFYLGNSAGARRWNTPSGRANFRPNSLPKDLIHERTHATGRVPDLIMQSMRSHDQ 667

Query: 665 YNTTIYGMDDRYRGVFGQRRVVFINPADLQMLGLKDGEWVDITSVWDDGVERRAEGFLLV 724
           YNTTIYG+DDRYRGV GQR V+F+N AD+  LG K G+  DI S+W+DG ERR +GF L+
Sbjct: 668 YNTTIYGLDDRYRGVKGQRDVLFVNEADIIRLGFKPGQKADIVSLWEDGRERRVKGFTLL 727

Query: 725 EYEIPRGCIGSYYPETNPLVPLESFADKARTPTSKSIPVLLSRSA 769
            ++IP G   +YYPE NPLVPLES  D + TPTSK + + L  ++
Sbjct: 728 AFDIPAGQAAAYYPEVNPLVPLESTGDGSHTPTSKFVAIRLEAAS 772