Pairwise Alignments

Query, 775 a.a., anaerobic (selenocysteine-containing) formate dehydrogenase from Herbaspirillum seropedicae SmR1

Subject, 788 a.a., formate dehydrogenase H alpha subunit from Agrobacterium fabrum C58

 Score =  860 bits (2221), Expect = 0.0
 Identities = 429/751 (57%), Positives = 539/751 (71%), Gaps = 8/751 (1%)

Query: 14  AGGWGALKYVALNLVKEHVADGRGLRTLLSQNQPDGFDCPGCAWPDREHTSTFEFCENGV 73
           AGGWGALK V   L+ E  A   G RTLL  NQPDGFDCPGCAW D EH S+FEFCENGV
Sbjct: 36  AGGWGALKSVGKRLL-ESGAPISGARTLLKTNQPDGFDCPGCAWGDPEHGSSFEFCENGV 94

Query: 74  KAVAAEATKKRVTPEFFAQHTVTELMQQSDFELEEHGRLTHPMVYDAATDKYKKIEWADA 133
           KAV+ EAT+ RV P+FFA+HTV+EL   SD++LE+ GRLTHPM YD A+D Y  + W DA
Sbjct: 95  KAVSWEATEARVPPDFFARHTVSELRSWSDYDLEKQGRLTHPMRYDRASDTYLPVSWDDA 154

Query: 134 FALMAKHLNALPDPDMADFYVSGRASNEAAFLFQLFVRQYGTNNFPDCSNMCHEPTSVGL 193
           FA + + LN+L  PD A+FY SGRASNEAAFL+QL VR YGTNNFPDCSNMCHE + VGL
Sbjct: 155 FAEIGRILNSLDSPDRAEFYTSGRASNEAAFLYQLMVRLYGTNNFPDCSNMCHEASGVGL 214

Query: 194 PGTVGIGKGTVLLEDFDHCDTLLLFGQNPATNHPRMMGELRHASKRGATIVAINPLKERG 253
             ++G+GKGTVLLEDF+  D + + GQNP TNHPRM+G+LR A+ RGA I   NP++E+G
Sbjct: 215 NASIGVGKGTVLLEDFEQTDAIFVIGQNPGTNHPRMLGDLRRAALRGARIAVFNPIREKG 274

Query: 254 LERFADPQSKVEMLTMGSTRISSMFIHPTLGGDLALIKGVIKRTIELDDAARAAGAERVI 313
           LERFADPQ K+EM+T  ST+I++ +  P  GGD+A ++G+ K     DDAARAAG   +I
Sbjct: 275 LERFADPQDKIEMITGSSTKIATNYYQPRQGGDMAAVRGMSKAVFAADDAARAAGEPAII 334

Query: 314 DVKFIEEHTAGFEEFAAQARAESWDDIVAESGVSREDIEKLAQVYVKGKAVIATWGMGLT 373
           D  FI +H A FE + A   A SW+ I+ +SG++R +IE+ A +Y+   +VIATW MG+T
Sbjct: 335 DYDFIADHAAEFEAYRAAVDATSWESILDQSGLTRAEIEEAAGIYMNAGSVIATWAMGVT 394

Query: 374 QHKHAVATIQLLSNMMMLRGNIGRQGAGLCPVRGHSNVQGDRTVGIDEKPTPAFLDRLEQ 433
           QH+H+V  ++ ++N M+LRGN+GR GAGLCPVRGHSNVQGDRTVGIDEK  PA LD LE+
Sbjct: 395 QHRHSVLIVREIANFMLLRGNVGRPGAGLCPVRGHSNVQGDRTVGIDEKAPPALLDALEK 454

Query: 434 VFGFKAPRHHGNDTVGSVMAMLEGRTKVFIGLGGNFAMATPDTPRTFEAMRSCNLTVHIT 493
             G   PR  G++TV +V AML+G+ + FI LGGNF  ATPD+P   +A     LTV+IT
Sbjct: 455 ELGVPMPRKPGHNTVEAVAAMLDGKAQTFIALGGNFLRATPDSPLIVKAFEKQKLTVNIT 514

Query: 494 TKLNRSHLVHGKDALILPTMGRTEIDMQKSG-PQGVTVEDSMSMVHVSYGINKPASEHLM 552
           TKLN SHLV G+ + +LP +GRTEID   +G  Q VTVEDSMSMVH S GIN PAS+ L 
Sbjct: 515 TKLNHSHLVPGETSFVLPCLGRTEIDRNSAGRSQIVTVEDSMSMVHGSGGINPPASDALR 574

Query: 553 SETAIVAHLAEATMKSRNNGPKIDWLWYAEDYSRIRDAIEQVYDAFKGYNERIANPGGFH 612
           SE AIVA +AEAT+ + N    ++W   A+DY  IRD IE+V   F  +NER+  P GFH
Sbjct: 575 SEVAIVAGIAEATLGNVN----VNWKALADDYDLIRDMIERVIPGFDNFNERVRIPRGFH 630

Query: 613 LGVASRDRVWKTASGKANFIVHDIPKDTPIHRARAIHGEKLLTLMTTRSHDQYNTTIYGM 672
           L  A+ +R W T + KA F    +P+ T     +A+  + L  L T RSHDQYNTTIYGM
Sbjct: 631 LRNAAAERQWNTPAKKATFYSGPLPEKT--EHQQALTRDNLFVLQTFRSHDQYNTTIYGM 688

Query: 673 DDRYRGVFGQRRVVFINPADLQMLGLKDGEWVDITSVWDDGVERRAEGFLLVEYEIPRGC 732
           DDRYRGV+G+R+V+F+NPAD++ LG    + VD+   + DGVER A  F LV Y IPRG 
Sbjct: 689 DDRYRGVYGERQVIFMNPADMEALGAHSRQRVDVIGEYGDGVERIARNFRLVPYNIPRGS 748

Query: 733 IGSYYPETNPLVPLESFADKARTPTSKSIPV 763
           +G YYPE N LVPL S+ + + TPTSKS+ V
Sbjct: 749 VGGYYPELNVLVPLSSYGEGSFTPTSKSVLV 779