Pairwise Alignments

Query, 396 a.a., ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

Subject, 383 a.a., two component sensor kinase from Agrobacterium fabrum C58

 Score = 77.0 bits (188), Expect = 8e-19
 Identities = 92/384 (23%), Positives = 159/384 (41%), Gaps = 26/384 (6%)

Query: 18  AEAIRIGEINSRHRLSTAGQ-AYRNGLALALEQINAAGGVGGRPLQLVVREDDGDADQAA 76
           +E+ R+G + S   ++ A +   R    LA+E+INAAGGV GR ++ V  +     +   
Sbjct: 4   SESWRVGVLFSETGVTGAVEKTQRFATLLAIEEINAAGGVLGRAIEPVAYDPQSTPNLYK 63

Query: 77  RNARALISQDHVEVLTGSMLSDVALAVSREAARGRTVLVVGDALSDAITLDKG---NRYT 133
             A  L  +D V V+ G  +S      +R+AA    V+   DAL    TL +G   +R+ 
Sbjct: 64  ELAMKLCDEDRVRVVFGCHMSS-----TRKAA--LPVIEARDALLFYPTLYEGFEYSRHC 116

Query: 134 FRVRPSTYMQAAMLAEQAARLPGRRWAVVAPNYEYGQSAVASFKLLLKQARPDVEFVSDQ 193
                +    +  L +      G+R  +V  NY Y   +  +   L  Q       V D+
Sbjct: 117 IYTGAAPNQNSVQLVDFLTTHYGKRVFLVGSNYVYPYESNRTISDLFLQVGGQ---VLDE 173

Query: 194 WPALGKIKADDVARAIRQ---SRPDGIFNATFGEDLQKFVQAGNRQQLFEGVRVVSMASA 250
                 +K +D+A+ IR    ++PD I++   G+ +  F  A            ++  S 
Sbjct: 174 MYVPLNLKTEDIAKIIRHIGAAQPDVIYSTIVGDGIIPFYTAFKEAGFDAATMPIASQST 233

Query: 251 GAPSLDPSQSEAIRDWLAIGYPWDQVSLPEHQRFLEAYLKRFSER--PQLSAVFGYTTMM 308
               +   + E     +     +  +  P    F+ AY KR+ ++  P   A   Y  + 
Sbjct: 234 SEADVIRMRPEVAEGHITAAPFFASLDTPRAHAFVSAYQKRYGKQMLPTAPAEAAYFQVY 293

Query: 309 AIAAGLKKSEGGDG-EVLVEAMRGLQFGSPLGPVSFRALDQQASLGAFVGLVSQKDGRSS 367
             AA L+++ G DG E L+ A+  +++ +P G V    L     L   V  V+   G   
Sbjct: 294 LYAAALQRA-GNDGLEQLLPALYEVEYDAPQGAVKIDRLTNHTHLWPRVARVNAHGGYDI 352

Query: 368 MRDWRYLDGAAYLPPPAYVRSRRP 391
           +      D +  + P  ++R  RP
Sbjct: 353 V-----YDPSLRVAPDPFMREYRP 371