Pairwise Alignments

Query, 300 a.a., LysR family transcriptional regulator from Herbaspirillum seropedicae SmR1

Subject, 288 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  156 bits (395), Expect = 5e-43
 Identities = 102/288 (35%), Positives = 154/288 (53%), Gaps = 18/288 (6%)

Query: 7   PLNAIRAFLAAARHQSFTLAAHELNVTHGAISRQIKNLEGYLGMPLFERRTRQVLLTERG 66
           PL A+RAF A ARH SF  AA EL+VT  A+S Q++ LE +LG PLF RRTR + LT  G
Sbjct: 9   PLLALRAFEAVARHLSFIKAASELSVTQSALSHQVQKLEQHLGKPLFIRRTRAIDLTADG 68

Query: 67  RQFFEEASPALEILANAARRVMRDAPTRTVV-INVRPSFAVRWLIPHLSDFVERYPGIAP 125
           +Q+++E  PAL+ +A AA R  R AP  TV+ I +  SFA  WL P L+ F+ RYP I  
Sbjct: 69  QQYYDEIRPALDAIA-AATRTQRVAPRATVLRIGLLASFATLWLAPRLAGFLTRYPHIQV 127

Query: 126 QVVTSTATVGKAGSSFDIAVRRGETNWPETLKVQRFMEDELVLVASPAL--LQAMPLEDV 183
           +++ S      A +  D+A+R G+ +WP+ ++  R M++ +  V SP    +Q  PL   
Sbjct: 128 ELLPSIQLANVAAAEVDLAIRYGKGDWPD-VQATRLMQEVISPVCSPTFKAMQDSPL--- 183

Query: 184 SGLARHTVLLSRSRRNDWEDWRKLAGLKRSRSQAMLHFDHVHFVLQAVVDGLGVALSPVS 243
                  ++ +  R  +W DW     +  +    ++  D+ + V++A V G G+A+    
Sbjct: 184 -------LMATSHRPFEWTDWSAHYQVDLAHHPRVMLHDY-NIVVEAAVAGQGIAMGRHR 235

Query: 244 LADNDLRSGRLVCPF--PDLRLTLAPYYLGINAQAGSEAQLFARWLAE 289
           L +  L+ G LV  F  P     +  + +         A  F+RWL E
Sbjct: 236 LIERRLQDGSLVEAFDWPPYHSDIGYWLIAPQGSTNEAAACFSRWLKE 283