Pairwise Alignments

Query, 300 a.a., LysR family transcriptional regulator from Herbaspirillum seropedicae SmR1

Subject, 305 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  149 bits (377), Expect = 6e-41
 Identities = 96/284 (33%), Positives = 148/284 (52%), Gaps = 10/284 (3%)

Query: 7   PLNAIRAFLAAARHQSFTLAAHELNVTHGAISRQIKNLEGYLGMPLFERRTRQVLLTERG 66
           PLNA R F  AA+ +SF  AA  L+VTHGA+SRQI+ LE  LG+ LFERR R + LT  G
Sbjct: 5   PLNAFRYFDIAAQTESFVRAAEHLHVTHGAVSRQIRLLEESLGVELFERRNRAIFLTPAG 64

Query: 67  RQFFEEASPALEILANAARRVMRDAPTRTVVINVRPSFAVRWLIPHLSDFVERYPGIAPQ 126
           R          E L  A +R+ + A    +V++  P+ A+RWLIP L  F   +P +   
Sbjct: 65  RALQGTTQAIFEQLEGAVQRLQQQARDNVLVLSCEPTIAMRWLIPRLPRFHATHPDLQLH 124

Query: 127 VVTSTATVGKAGSSFDIAVRRGETNWPETLKVQRFMEDELVLVASPALLQAMPLEDVSGL 186
           +V +   +  A S  D+A+RR + +W   L  Q+  ++ +  V  PA          + L
Sbjct: 125 LVAAGGPLDFARSGVDLAIRRDDFHWDNQLYSQKICDEWIGPVCHPAA--------CARL 176

Query: 187 ARHTVLLSRSRRNDWEDWRKLAGLKRSRSQAMLHFDHVHFVLQAVVDGLGVALSPVSLAD 246
               +L S +R   W  W +L+G +++R      ++H +  +QA   GLG+A++   +  
Sbjct: 177 DGQRLLHSTTRPAAWPTWLRLSG-QQARHCERSDYEHFYLSIQAASAGLGLAIASALMVR 235

Query: 247 NDLRSGRLVCPFPDLRLTLAPYYLGINAQAGS-EAQLFARWLAE 289
           ++L SG+L  PF  +R   A + L     A S + Q FA W+ +
Sbjct: 236 DELDSGQLQAPFGFVRDGSAYHLLSPQPLADSGKRQRFAEWIMD 279