Pairwise Alignments

Query, 300 a.a., LysR family transcriptional regulator from Herbaspirillum seropedicae SmR1

Subject, 305 a.a., Glycine cleavage system transcriptional activator GcvA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  194 bits (492), Expect = 3e-54
 Identities = 113/285 (39%), Positives = 162/285 (56%), Gaps = 7/285 (2%)

Query: 7   PLNAIRAFLAAARHQSFTLAAHELNVTHGAISRQIKNLEGYLGMPLFERRTRQVLLTERG 66
           PLNA+R F AAARH SFT AA EL VT  A+S QIK+LE +LG+ LF RR R +LLTE G
Sbjct: 7   PLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSLLLTEEG 66

Query: 67  RQFFEEASPALEILANAARRVMRDAPTRTVVINVRPSFAVRWLIPHLSDFVERYPGIAPQ 126
           + +F +       L  A R++   +    + +++ PSFA++WL+P LS F   YPGI  +
Sbjct: 67  QSYFLDIKEIFSQLTEATRKLQARSAKGALTVSLPPSFAIQWLVPRLSSFNSAYPGIDVR 126

Query: 127 VVTSTATVGKAGSSFDIAVRRGETNWPETLKVQRFMEDELVLVASPALLQA-MPLEDVSG 185
           +        K     D+A+  G  NWP  L+V++   + L+ V SP LL    PL+    
Sbjct: 127 IQAVDRQEDKLADDVDVAIFYGRGNWP-GLRVEKLYAEYLLPVCSPLLLTGEKPLKTPED 185

Query: 186 LARHTVLLSRSRRNDWEDWRKLAGLKRSRSQAMLHFDHVHFVLQAVVDGLGVALSPVSLA 245
           LA+HT+L   SRR DW+ + +  GL     Q    F H   VLQA + G G+AL+   +A
Sbjct: 186 LAKHTLLHDASRR-DWQAYTRQLGLNHINVQQGPIFSHSAMVLQAAIHGQGIALANNVMA 244

Query: 246 DNDLRSGRLVCPFPDLRLTLAPYYL---GINAQAGSEAQLFARWL 287
            +++ +GRLVCPF D+ ++   +YL      A+ G  A  F +W+
Sbjct: 245 QSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQAELGKIA-AFRQWI 288