Pairwise Alignments

Query, 324 a.a., ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 339 a.a., dipeptide ABC transporter permease DppB from Serratia liquefaciens MT49

 Score =  226 bits (577), Expect = 5e-64
 Identities = 120/318 (37%), Positives = 199/318 (62%), Gaps = 17/318 (5%)

Query: 19  MTVIVFFGLHMI-GNPVDILIGQDVDQVDR-LRIIQELGLDQPVWRQYLAFLNGALHGNL 76
           +T++ F  +HMI G+PV I+ G+     +R  +++ E+GLD+P+++QY ++++  L G+L
Sbjct: 19  ITLLTFAFVHMIPGDPVTIMAGERGISAERHAQLMAEMGLDKPLYQQYFSYVSNVLQGDL 78

Query: 77  GNSFVYNTPAILLIFQRLPATLELACAALLLALVVGVPLGLFAGMKPDHPFSRLVMTTSI 136
           G S             R  ATLEL   A++ A++VG+P+G+ A ++    F    +  S+
Sbjct: 79  GTSLKSRISVWDEFVPRFKATLELGFCAMIFAVLVGIPVGVLAAVRRGSIFDHTAVGISL 138

Query: 137 FGFSLPTFWIGLMLIMAFSVTLGWLPSGGR-------GQTAELFGVQ------WSWLT-- 181
            G+S+P FW G+MLIM  SV L   P  GR         T  L G        W      
Sbjct: 139 TGYSMPIFWWGMMLIMLVSVQLNLTPVSGRVSDTVFLDDTLPLTGFMLIDTLIWGEPGDF 198

Query: 182 ADGWRHMILPAINLSLFKISLVIRLTRANVREVLPMDFVKFARAKGLSPARVVLMYVLRN 241
           AD   HMILPAI L    +++++R+TR+++ EVL  D+++ ARAKG+S  RV++++ LRN
Sbjct: 199 ADAVMHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGVSRMRVIVVHALRN 258

Query: 242 TLIPLVTVVGLEFGSTIAFAVVTESIFAWPGAGKLILDSINALDRPVIVAYLMVIVCMFV 301
            L+P+VTV+GL+ G+ +A A++TE+IF+WPG G+ ++D++   D PV+   ++++ CM +
Sbjct: 259 ALLPVVTVIGLQVGTMLAGAILTETIFSWPGLGRWLMDALQRRDYPVVQGGVLLVACMII 318

Query: 302 TINLVVDVLYKLLDPRVR 319
            +NL+VDVLY +++PR+R
Sbjct: 319 LVNLLVDVLYGVVNPRIR 336