Pairwise Alignments

Query, 324 a.a., ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 322 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  261 bits (666), Expect = 2e-74
 Identities = 133/315 (42%), Positives = 203/315 (64%)

Query: 5   IARSVVQALMVVLLMTVIVFFGLHMIGNPVDILIGQDVDQVDRLRIIQELGLDQPVWRQY 64
           I + +  A++V+L + +I F    + G+PV++++G+   Q DR  + + LGL+  +  QY
Sbjct: 5   IIKRLGNAVLVMLSVALIAFLIFRLAGDPVELMVGEQTSQEDRAALRERLGLNDSLPTQY 64

Query: 65  LAFLNGALHGNLGNSFVYNTPAILLIFQRLPATLELACAALLLALVVGVPLGLFAGMKPD 124
           L F+  A  GN G S+      + LI +R PATLEL   A +++LVVG+PLG+   ++  
Sbjct: 65  LRFVKDAAQGNFGVSYRNGQQVLPLIAERFPATLELVLVATVISLVVGLPLGVLTAIRRG 124

Query: 125 HPFSRLVMTTSIFGFSLPTFWIGLMLIMAFSVTLGWLPSGGRGQTAELFGVQWSWLTADG 184
             ++  +   SI G SLP+F +G++LI+ FSV+LGW P+ GRG   +L       LT+ G
Sbjct: 125 KWYTEGLQFLSIVGVSLPSFVVGILLILVFSVSLGWAPAFGRGDVVQLGWWSTGLLTSSG 184

Query: 185 WRHMILPAINLSLFKISLVIRLTRANVREVLPMDFVKFARAKGLSPARVVLMYVLRNTLI 244
              +ILPAI LSL++I+LV+RL RA + EVL  DFVKFARA+G+   R+   + LRN L+
Sbjct: 185 RAALILPAIALSLYQITLVMRLVRAEMLEVLRSDFVKFARARGIPRWRIYFRHALRNCLM 244

Query: 245 PLVTVVGLEFGSTIAFAVVTESIFAWPGAGKLILDSINALDRPVIVAYLMVIVCMFVTIN 304
           P+VT+  +  GS IAFA++TE++F WPG G L + ++  LD PV+ AYL +I  +FV +N
Sbjct: 245 PVVTLTTMNVGSLIAFALITETVFQWPGMGMLFIQAVTFLDIPVMAAYLCIISFIFVVLN 304

Query: 305 LVVDVLYKLLDPRVR 319
             VD+ Y ++DPR+R
Sbjct: 305 TFVDIAYAVIDPRLR 319