Pairwise Alignments

Query, 1346 a.a., hypothetical protein from Herbaspirillum seropedicae SmR1

Subject, 2034 a.a., translocation/assembly module TamB domain-containing protein from Rhizobium sp. OAE497

 Score = 69.7 bits (169), Expect = 3e-15
 Identities = 97/470 (20%), Positives = 184/470 (39%), Gaps = 42/470 (8%)

Query: 863  GLSELKLRSDFQGEQMRLSGRVDASRIGTLAL--GGQIGLQRVDQLLTLADGSPLALNAR 920
            GL+ L + +D +     L+     S  G L++  GG +G+         A    L L  +
Sbjct: 1560 GLAPLGITADGKLAGQTLTIDTGLSGEGGLSMKGGGSVGI---------AGQRALNLQFK 1610

Query: 921  LELPELKRIGDLIGPQVSLNGKLSADLNVAGTLAQPKLSGAVNGDDLAVTQFDQGIQLKD 980
              LP       L    +  +G    DL + G    P ++G +N     +    + + L +
Sbjct: 1611 GNLPFAILGAQLAQQGLVADGAADIDLRITGNAGGPVINGTINTSGAKIVDVRRNLALNN 1670

Query: 981  GIVRIVMDSNVIDLRQIEFH-GGRGTLRAGGKIQLGADNPDLNATLTAEQLELFASPDRR 1039
                I M+     + +   +    G + A G + +    P+    +  E        D+ 
Sbjct: 1671 LTANITMNGQQATISRFSANLASGGAISASGTVGI---QPNSGYPVNIE-----VKLDKA 1722

Query: 1040 LMLSGQGKISNVNEQLHVDGKFTVDHAL---FDLPKSSAPKLGDDVVIISRSGKNQVGGQ 1096
            + + G   ++ V+  L + G    +  L    +L K+S          +       +   
Sbjct: 1723 VYVDGTLVVATVDGTLGMRGPLLSNPTLSGRLNLEKASITVPEKLPTSLREINIKHIHAP 1782

Query: 1097 ASSKQRLEAATEKPASKFAPFI--NIAVDLGNDFRFRGSGADLRLRGEMAVRSEPLSPMR 1154
            A+ + +L     + AS+ +  I  ++ +D  +    RG G D  L G + ++    SP+ 
Sbjct: 1783 AAVRAQLRDEGNQGASQKSSTIALDLRLDAPSQIFVRGRGIDSELGGSVTIKGTAASPV- 1841

Query: 1155 ASGTINVAEGSYEAFGTKLNI-ERGIINFQGPIANPNINILAMRRNQDVEAGVSVTGNAN 1213
             SG   +  G       ++N  ++  I F G +  P +++ A   +      V V G A 
Sbjct: 1842 VSGGFTMRRGRLTILNRRMNFTDKSRITFAGDLT-PALDMEASSTSGTTTLTVDVAGLAT 1900

Query: 1214 QPRVQLVSEPNVPDDEKLSWMMFGHGTDNSSIGQRTASSQALALVGNMGGKR------IA 1267
             P +   S P +P DE L+ ++FG      S  Q    + A++ +   GG+       + 
Sbjct: 1901 DPAITFSSSPALPQDEVLAQLIFGQSMSKLSPVQIAQLADAVSQLA--GGRSTSLFEGLR 1958

Query: 1268 KDIGLDQFSIGSSESGLTNDQVVNLGKAITEKITLGYEQSLQGAASVAKA 1317
              +G+D   I + E G T+   V++G+ + E+    Y +  QG  + AKA
Sbjct: 1959 NQLGVDDLDISTDEKGQTS---VSVGRYLNERT---YFELQQGGEAGAKA 2002



 Score = 31.6 bits (70), Expect = 8e-04
 Identities = 149/693 (21%), Positives = 253/693 (36%), Gaps = 93/693 (13%)

Query: 552  GDLPMAGRGDIDLAGMRLLPSQAHLQVAGNTLDLNGSFGAANDKLKLKIDAPQLARLGYG 611
            G + +A  G +D AG   L    +  V G +  ++  +     + +  I    LA  G  
Sbjct: 325  GSVVIAASGTLDPAGNNSL----NANVLGTSGPVDFRWPLEKGEARFLISGLNLALTGDA 380

Query: 612  LSGLLRLDGQLGG------TRQRPSLQASYQAEQLG--FGPHKLQHLAGQ-AEIHSNLAA 662
             +  L     L        T     L A   A  +    G  +++ +AG  A +  NL  
Sbjct: 381  QAARLNASASLDAVTLPQATASNVKLTAKSDAFNIAKRSGGVQIRLVAGDTAFLDPNLNR 440

Query: 663  GVASPENRLA---LTLEGDGYSGPQAELAQLAVKLDGTYAKHSLSLKANGKLLNRPLALT 719
             +  P    A   +  +  G++G   E A  +  ++GTY   + +L  N KL   P AL 
Sbjct: 441  AIQGPVTLAAPIQIAPDSIGFNGTTLESANASGGVNGTYRLANQALTGNAKLTIEPAALP 500

Query: 720  LAAHGQVTEKTRGQYGWNGSIDQLSNDGFPRIAMLHPLALQASPEAVEAGSTRIEIDRTA 779
             A           ++    SI+       P    L  L ++ S     AG+  ++ D  A
Sbjct: 501  PA--------VAPRFDTPISIETQVAGTIPSKINLSNLIVK-SGTIETAGNVTLDGDTLA 551

Query: 780  LDLRHLSWRQGRIASAGEVRALDVGRLLELAQQLGAAAPPMKTDL------VLD---SDW 830
             D   LS R   IA   E  + +VG  + ++  L A A  +K +L       +D   S+ 
Sbjct: 552  AD---LSGRLPDIAKLAENASGEVGYTVNVSGALSALA--IKANLKSATLHTVDRTLSNL 606

Query: 831  DFSL---AESARGYVQIARQ---SGDLRLVTSNGEATLGLSELKLRSDFQGEQMRLSGRV 884
            D ++   A+ A     I  +    G    + +N  +  G++ +   S   G   +L+G +
Sbjct: 607  DVNITGTADPAAPQATIEAKGAIDGQPLTINANALSKDGITSIPSISVEAGTN-KLNGNI 665

Query: 885  --------------DASRIGTL-ALGGQIGLQRVDQLLTLA-DGSPLALNARLELPELKR 928
                          D   +G L AL GQ     +     +A DG  +++ A+     ++R
Sbjct: 666  ELTPSFLPSGKLSFDFPDVGLLAALAGQRAEGDLKGGFDIANDGGKISIAAKASGSGIRR 725

Query: 929  IG-DLIGPQVSLNGKLSADLNVAGTLAQPKLSGAVNGDDLAVTQFDQGIQLKDGIVRIVM 987
             G  L+ P + +          +G +   ++S   N        F Q     +  +    
Sbjct: 726  DGLSLVRPDIDVTISDLKAFAASGVVKADEISSGANVISGLALNFTQQQNRTNFDLSSTY 785

Query: 988  DSN-VIDLRQIEFHGGRGTLRAGGKIQLGADNPDLNATLTAEQLELF----ASPDRRLML 1042
            D+N ++    +E +GG   +      QL A   ++   L A          A  D   + 
Sbjct: 786  DANPLVAAGAVETNGGDMKIELN---QLSAKPRNIAVDLAAPTAVTISGGAAKLDGLTIR 842

Query: 1043 SGQGKIS---NVNEQLHVDGKFTVDHALFDLPKSSAPKLGDDVVIISRSGKNQVGGQASS 1099
            +G G +S   +  E L ++   T+      L  +  PKL     I   SG   V G  ++
Sbjct: 843  TGDGSVSVSGSAGETLDINA--TIKDLPASLANTFVPKLEAAGTI---SGTVTVTGTPAA 897

Query: 1100 KQRLEAATEKPA----SKFAPFINIAVDLGNDFRFRGSGADLRLRGEMAVRSEPLSPMRA 1155
                     K A    +K A     A++ G  F      AD RL  E     +    ++A
Sbjct: 898  PLANFKLDWKDAASSHTKAAGLSGFAIEAGGKF------ADNRLDFETTAAGDKKLSLKA 951

Query: 1156 SGTINVAEGSYEAFGTKLNIERGIINFQGPIAN 1188
            SG   VA    +A    L+++  I N    +AN
Sbjct: 952  SGNYTVAGADAQA----LSVDAEIANVPAALAN 980