Pairwise Alignments

Query, 714 a.a., ligand-gated channel from Herbaspirillum seropedicae SmR1

Subject, 709 a.a., putative Outer membrane ferric siderophore receptor from Pseudomonas putida KT2440

 Score =  174 bits (440), Expect = 2e-47
 Identities = 195/753 (25%), Positives = 316/753 (41%), Gaps = 92/753 (12%)

Query: 10  VRRLPATLCLAFLALPAYAAERDGGNEGEPSGESSLPVVEVRDQRRSPDP----RARRVG 65
           +RR   +LC+     P   AE +  ++       +L +    D  R+  P    +A R  
Sbjct: 1   MRRTFVSLCVLHAVSPLAFAEPETLSDPNQIELQALSITSTADSERADGPVEGYKATRSA 60

Query: 66  TATRSAADPMEVPQSIQSVSVEQVSVYGARTLAGALL---GVPGISSISDTRFDAFRIRG 122
           +ATR+     E PQS+  V  + +   GA  L   L    GV   ++        F +RG
Sbjct: 61  SATRTDTALHETPQSVSVVPNDVLVDTGATRLQEGLDYAGGVGRANNFGGQGLTTFTVRG 120

Query: 123 FSSANDLLLDGMRDDPQYVRG--LGNIERVEVLRGPASVLYGRGSGGGVINRISKQPGQD 180
           F++  +   +G   +  Y        +ER+EV+RGPAS LYGRG  GG  N +SKQP   
Sbjct: 121 FTTG-EFYRNGFPINRGYPNAPDANTVERLEVIRGPASSLYGRGDPGGTFNVVSKQP--- 176

Query: 181 VASQATLSLGS----AGLLGAALDWNRPLAPHWAL--RINTGREHAGSFRDTVNGTRQYF 234
              ++ ++LGS     G+  A LD   PL+   +L  R+N   E   SFRD V   R   
Sbjct: 177 -LPESKVTLGSQFDDQGMHRATLDATGPLSQDGSLAYRLNVLGEGGDSFRDDVESERYDV 235

Query: 235 APALKWE-SGRDSWLLQAEYDEYERVPDRGIPGRAIATANGEPTAYALPSAGHEQFFGAA 293
           AP + W+ +       + ++       DRG+      T           SA  + +    
Sbjct: 236 APVISWQVNDATKITFEGDFMRNNHPLDRGLTRYPTQTG----------SASRDTYIWEK 285

Query: 294 GRD-VIRDIHMSLRSTLTRALSQDWTLRHALALMDLNSNFDNTFVTQAYQSAPLDLD--R 350
           G D ++ + +   +      L+ +WTL      +      D +    A + + L  D   
Sbjct: 286 GSDNLLHNDNNMAQVRFEHLLNDNWTLGGGFQYL------DGSLKGNAVEGSNLLADGRT 339

Query: 351 VQRTRYQQNLQQRSVQNNLELLGQLG----AHDLLLGVEH------SWQKREPRLWSV-- 398
           +QR    + L+       L L G       +H LL G+E+      S  +R    + +  
Sbjct: 340 LQRNFNYRKLEWTDRDWQLNLTGHFDTGTLSHTLLTGIEYENYHYSSIIRRSSASYPIDI 399

Query: 399 -------AAPAVSAVTPENTRNGDDPTTPFQMNYHKASNLGLYVQDKITLAAHWKMLAGL 451
                    PA++AV          PTT    +         ++QD++ L    K LAG+
Sbjct: 400 YDPVLGQPRPALAAV----------PTT---WDSENLQTWAFFIQDQVALTERLKALAGV 446

Query: 452 RWDRFEVDSRNRRNGVRS-ERTAHALSPRIGVVWEALPGQHAYLSWSKNFAPVGGDVIGI 510
           R++RFE D  ++R   R   +  + ++PR G++++       Y + +++F P  G     
Sbjct: 447 RFERFEHDYDDKRPANRDFSKGENGVTPRFGLIYDLTDTVAVYANTARSFKPNTG----- 501

Query: 511 TPDARGNFNDLKPQFSRQVEAGIKSEWLDRRLSTTLAWFQLELFNRNVADP--VRPGFFE 568
           TP + G F+   P+  +  E G+K E LDR+LS   A +Q+   N    DP      +  
Sbjct: 502 TPASGGGFD---PEKGKSYELGVKWEALDRQLSVDAAIYQITKENVLTRDPNDSTNTYSI 558

Query: 569 QSGLERNRGIELSVEGELAAPWFVRAGWAIQSAKIVQAEPKFVGKRASGVSGRGGSLFLS 628
            +G  R+RG++++V G L   W +  G+A   A++ +      G   + +     SL  +
Sbjct: 559 AAGEVRSRGLDINVAGNLTPEWRMIGGYAYVDAEVTKDTTLPKGTHLANIPRNTFSLLNT 618

Query: 629 YAPTLGWFAELGLTVEGARYAD------RDNLLELPAYTRWDGKMGYRLDE-AEFTLAVT 681
           Y    G    LGL V G +Y D            +  Y+  D    Y+++E     L V 
Sbjct: 619 YEFQDGLAKGLGLGV-GVKYVDDRAGQTSTATYTMERYSVVDLLSFYKVNEHVRLNLDVK 677

Query: 682 NLANRRYYESATGLSQVRPGAPRALLLTAAYKF 714
           N+ N+ Y E A   S V PGAPR +    +Y F
Sbjct: 678 NVFNKGYDEGAFN-SYVYPGAPRTVQAGVSYTF 709