Pairwise Alignments

Query, 428 a.a., Rieske (2Fe-2S) protein from Herbaspirillum seropedicae SmR1

Subject, 430 a.a., putative dioxygenase hydroxylase component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  262 bits (669), Expect = 2e-74
 Identities = 154/413 (37%), Positives = 224/413 (54%), Gaps = 10/413 (2%)

Query: 18  DLVQDAVVDPSLYTDPALFEAEMDKIFYKTWIWVAHESEIKNPGDFKTAQIGRQPVIVVR 77
           DLV++  V  SLYTDP +++AE+ KI+Y+TW++V HESE+ N  D+    IG +P+++ R
Sbjct: 23  DLVREDHVHGSLYTDPTIYQAELQKIWYRTWVYVGHESEVPNANDYVMKSIGPEPILMTR 82

Query: 78  DKTGKINVLENRCRHRGATVCEKHKGNATGFTCPYHSWSYGLDGKLRGLPYPEGYEDVIE 137
           DK+G+IN+L NRC HRG  VC   KGNA  FTCPYH W++G DG LRG P+P GYE   +
Sbjct: 83  DKSGQINLLHNRCPHRGNRVCMTEKGNARSFTCPYHGWTFGNDGALRGYPFPSGYEGA-D 141

Query: 138 KADLPLQSL-RCESYHGMIFASFNQEIEPLSDFLGHAKKWID-LFMKQGAGFPIKVQGEH 195
           ++ L L  + R  S+ G +F SF +E E L + LG A   ID L M    G      G  
Sbjct: 142 RSQLGLGKVARVASHRGFVFGSFAEEGESLLEHLGAAAGAIDALCMNSPEGEVEVTAGYL 201

Query: 196 KFSFKGNWKIQLENTTDGYHFPVVHKTFLSSVDEETSEMLSFMTDDQSITRSLGNGHSVM 255
           K   K NWK  +EN TDGYH   VH +           +  + +D  +++R  G GH+  
Sbjct: 202 KHKVKANWKFLVENETDGYHPSFVHASIFEVAQSGIGTL--YDSDSTAVSRDFGKGHTEN 259

Query: 256 IMVPEHVDLDVDDG-SEQLQERFAHVTEELSKTMPPEQVRRIVRSLHGAGFNLNLFPNVA 314
            + PE    DV  G      ++      ++      ++ R I+  + G   ++ +FPN+ 
Sbjct: 260 DLRPEFRKRDVPMGWFGTTADKLPAYVAQMETAYGKDKAREIM--IDGTP-HIMIFPNLF 316

Query: 315 MSMSFFRVLHPVSVGETQIRHVALGMDGGPEIANRERLRIHEHFQGPFGFGSPDDAEAWE 374
           ++     VL P+SV  T     A+   G P+I  R R +      GP GF   DDA  +E
Sbjct: 317 IAEIQLFVLQPLSVDHTVQHVTAIQFKGAPDINRRLRQQTMGSV-GPAGFLLADDAAMYE 375

Query: 375 RVQAGSHAGRDAPILVNRGLNREWVDDNGDKVSHSTDETGMREAYAMWKKMME 427
           R Q G  +     + + RG +RE +D+NG ++S +TDET  R  +  +K MME
Sbjct: 376 RTQLGVQSSNPEWLYLGRGRHRERLDENGYRISDNTDETPSRGIWRHYKSMME 428