Pairwise Alignments

Query, 326 a.a., LysR family transcriptional regulator from Herbaspirillum seropedicae SmR1

Subject, 297 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  142 bits (358), Expect = 1e-38
 Identities = 92/276 (33%), Positives = 150/276 (54%), Gaps = 4/276 (1%)

Query: 1   MDIRQLKYFVAVANTRNFTRASEQLHIAQPPLSRQIQLLEEELGVQLLLRNSRPLRLTEA 60
           M++R L+YF+AVA   +F RA++ L I+QPPLS+QIQ LE+E+G +L  R +R + L+EA
Sbjct: 1   MELRHLRYFIAVAEELHFGRAAQVLGISQPPLSQQIQALEQEVGARLFERTNRRVELSEA 60

Query: 61  GRVFYEQALQILNRLDQLKNATQQIGLNQRQTLSIGFVASTLY-GGLPMLVRKLRQHYPE 119
           GR+F  +A  +L ++D+  +  ++  L +   L IGF +S  +   +P  +   RQ +P 
Sbjct: 61  GRLFLHEARLVLAQVDKAADVARRAQLGELGELKIGFTSSAPFNSSIPQAIFAFRQAFPA 120

Query: 120 VDIQLLELTSMQQFAALKSGRIDVGFGRIRSNDATVARIVLREEKLVLAIPPSFAL-AGS 178
           V + L E++S +   +L    I VG  R      +++ + L  E LV  +     L AGS
Sbjct: 121 VHLNLQEMSSTEVAESLVDESIQVGLMRPLPLPDSLSVVELMREPLVAVMNAGHPLVAGS 180

Query: 179 NQRVSLKEVHGQKLIVYPKEPRPSFADHILSLLNDQDIHPAEVHEVREIQTALGLVAAES 238
            + + L ++  +  + +P+         +LSL  D    P    E  E  T +GLVAA  
Sbjct: 181 ERGLHLAQLAEEPFVFFPRSYGSGLYAQLLSLCRDAGFSPHFAQEAGEAMTIIGLVAAGL 240

Query: 239 GICLIPAS-ARLRND-LHYRLIDDARATSPIILTHR 272
           G+ ++PAS  R+R D + YR + D  A + + L  R
Sbjct: 241 GVSVLPASYQRIRIDGVVYRTLLDPEAVTSVWLVQR 276