Pairwise Alignments

Query, 172 a.a., OmpA/MotB from Herbaspirillum seropedicae SmR1

Subject, 166 a.a., peptidoglycan-binding protein from Pseudomonas simiae WCS417

 Score =  118 bits (295), Expect = 6e-32
 Identities = 71/171 (41%), Positives = 104/171 (60%), Gaps = 11/171 (6%)

Query: 1   MRTISTFALIVSSAVLLAACSSTKLDDKAN-APVQTGASNGADTRTVGTVNAGSVD-PLN 58
           M     FA +  +  +   CSS   D+    A V   A  GA+T        G+VD  L+
Sbjct: 3   MLKFGKFAALALALSVAVGCSSKGGDNAGEGAAVDPNAGYGANT--------GAVDGSLS 54

Query: 59  DPQGVLAKRSVYFDYDSYTVKPEYRTVIENHAKYLVAHKDRKVIIQGNTDDRGGAEYNLA 118
           +   + A  + YF+YDS  +KPE    ++ HAK L A+  R V+++GNTD+RG  EYN+A
Sbjct: 55  EEAALRAITTFYFEYDSSDLKPEAMRALDVHAKDLKANGAR-VVLEGNTDERGTREYNMA 113

Query: 119 LGQKRAEAVRKALVLLGVSDAQVEAVSFGKEKPKALGQDEASYAENRRADI 169
           LG++RA+AV++ LVL GV+  Q+E VS+GKE+P A G DE S+A+NRR ++
Sbjct: 114 LGERRAKAVQRYLVLQGVAPGQLELVSYGKERPVATGHDEQSWAQNRRVEL 164