Pairwise Alignments

Query, 307 a.a., nitrate ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 305 a.a., Cyanate ABC transporter, permease protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  415 bits (1067), Expect = e-121
 Identities = 212/299 (70%), Positives = 237/299 (79%), Gaps = 8/299 (2%)

Query: 15  PAGPAGSHPPAAVNSQAP-ASPPAAIPARRA-----KKRLASGGLFMRVAPPLLGLALLV 68
           P       P  AV+   P A+ P A P R+A     ++RLA  G F  V PP LGL  LV
Sbjct: 9   PLEAVAPSPAVAVSHPKPVAAQPVAEPRRQAAPSLWRERLA--GFFRSVLPPALGLGFLV 66

Query: 69  LVWQIIALKTSSFPTPWVTLKEAGVMFADPFYRNSPNDQGIGWNVLASLQRVGTGFGLAA 128
           LVW ++A   S  PTP  T  +A  +F+DPFY+  PNDQG+GWNVL SLQRV  GFGLAA
Sbjct: 67  LVWSLVASGNSGIPTPLATWTQAVGVFSDPFYQAGPNDQGVGWNVLMSLQRVAVGFGLAA 126

Query: 129 LVGIPLGFAIGRVEFLARMFGPIISLLRPVSPLAWLPIGLLVFKSANPAAIWSIFICSIW 188
           LVGIP GFAIGR +FL+RMF P+ISLLRPVSPLAWLPIGLLVFK ANPAAIW+IFICSIW
Sbjct: 127 LVGIPAGFAIGRFDFLSRMFNPLISLLRPVSPLAWLPIGLLVFKGANPAAIWTIFICSIW 186

Query: 189 PMIINTAVGVQRVPQDYMNVARVLNLSEWKVLTKILFPSVLPYMLTGVRLSIGTAWLVIV 248
           PMIINTAVGVQRVPQDYMNVARVLNLSEWK+ TKILFP+VLPY+LTGVRL++GTAWLVIV
Sbjct: 187 PMIINTAVGVQRVPQDYMNVARVLNLSEWKIFTKILFPAVLPYLLTGVRLAVGTAWLVIV 246

Query: 249 AAEMLTGGVGIGFWVWDEWNNLNVPHIIIAIVVIGVVGLVLEQLLVALAKAFTYEQVNN 307
           AAEMLTGGVGIGFWVWDEWNNLNV  IIIAI VIGVVGLVLE  L+ LA  FT+E+V +
Sbjct: 247 AAEMLTGGVGIGFWVWDEWNNLNVASIIIAIFVIGVVGLVLEFGLIKLATLFTFEEVKS 305