Pairwise Alignments

Query, 404 a.a., ABC transporter ATP-binding protein from Herbaspirillum seropedicae SmR1

Subject, 361 a.a., Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  414 bits (1064), Expect = e-120
 Identities = 213/370 (57%), Positives = 272/370 (73%), Gaps = 25/370 (6%)

Query: 17  ISLLLLLALMIVFPFVAQQFG-NSWVRIMDVALLYIMLALGLNVVVGFAGLLDLGYIAFY 75
           I  L+  A +++ P + Q  G NSWVRI+D+AL+Y++LALGLN+VVG+AGLLDLGYIAF+
Sbjct: 10  IIFLIAAAALLLLPIILQSTGSNSWVRIVDIALMYVLLALGLNIVVGYAGLLDLGYIAFF 69

Query: 76  AIGAYSAGLLASPQFAAVIESFVNTYPSVGNFLVWLCGPEIVQNGIHLSLWLIVPISALL 135
           A+GAY   LL SP  A       +T+P++           +  NG+H ++WL++ ++A +
Sbjct: 70  AVGAYVFALLGSPHLA-------DTFPAI---------KAMFPNGLHYNIWLVMILAAAV 113

Query: 136 AALFGALLGAPTLKLRGDYLAIVTLGFGEIIRIFMNNLNAPVNITNGPQGINLIDPIKVF 195
           A + G +LGAPTLKLRGDYLAI+TLGFGEIIRIF+ N++ P+NITNGP+GI+ ID I VF
Sbjct: 114 AGVVGMILGAPTLKLRGDYLAIITLGFGEIIRIFLLNMDRPLNITNGPKGISQIDTISVF 173

Query: 196 GVSLAGEPGSGSMVKVFGMSMPSVNAYYFLFLLLCIGVIFFSVRLQDSRLGRAWVAIRED 255
           G+ L      G  + +   +   V  YY+LFL   +  I  S RLQDSR+GRAW+AIRED
Sbjct: 174 GLDL------GKRLTIGDYTFQPVTLYYYLFLFFVVLAIVISYRLQDSRIGRAWMAIRED 227

Query: 256 EIAAKAMGINTRNVKLLAFAMGASFGGVAGAMFGAFQGFVSPESFSLTESIAVLAMVVLG 315
           EIAAKAMG+NTRN+KLLAF MGASFGGV+G +F +FQ FVSPESFSL ES+ V+AMVVLG
Sbjct: 228 EIAAKAMGLNTRNLKLLAFGMGASFGGVSGVLFASFQRFVSPESFSLMESVMVVAMVVLG 287

Query: 316 GIGHIPGVVLGGVILAALPEVLRHVVEPVQMAIFGKVWIDAEVLRQLLYGLAMVVIMLTR 375
           GIGHIPGVVLG ++LA LPEVLRHV  P+     G+  +  E+LRQLL  LAMV++ML R
Sbjct: 288 GIGHIPGVVLGALLLAGLPEVLRHVAHPLTELTGGR--LGPEILRQLLIALAMVIVMLLR 345

Query: 376 PAGLWPSPRH 385
           P GLWPSP H
Sbjct: 346 PRGLWPSPEH 355