Pairwise Alignments

Query, 362 a.a., spermidine/putrescine ABC transporter ATPase from Herbaspirillum seropedicae SmR1

Subject, 370 a.a., spermidine/putrescine ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  429 bits (1102), Expect = e-125
 Identities = 220/343 (64%), Positives = 257/343 (74%), Gaps = 2/343 (0%)

Query: 1   VQQSDVLVQFCGVKKTYDGENLIVKNLDLDIRRGEFLTLLGPSGSGKTTCLMMLAGFEFP 60
           V  +DVLV F GV+K+YDGENLIVK+L+L+IR+GEFLTLLGPSGSGKTT LMMLAGFE P
Sbjct: 4   VDSNDVLVSFRGVQKSYDGENLIVKDLNLEIRKGEFLTLLGPSGSGKTTSLMMLAGFETP 63

Query: 61  TGGEIRLDGQLLNRVPPHKRNIGMVFQNYALFPHMTIAQNVAYPLSVRKMDRATREAKVK 120
           T GEI+L G+ +N VPPHKR+IGMVFQNYALFPHMT+A+N+A+PLSVR + +     +VK
Sbjct: 64  TAGEIQLAGRSINNVPPHKRDIGMVFQNYALFPHMTVAENLAFPLSVRALSKTDISERVK 123

Query: 121 QALDMVQMGKFGDRYPTQLSGGQQQRVALARTLVFDPQLVLMDEPLGALDKQLREHMQLE 180
           + L MVQ+  F  RYP QLSGGQQQRVALAR LVF+PQLVLMDEPLGALDKQLREHMQ+E
Sbjct: 124 RVLSMVQLDAFAQRYPAQLSGGQQQRVALARALVFEPQLVLMDEPLGALDKQLREHMQME 183

Query: 181 LKALHKRLGVTFVYVTHDQSEALTMSDRVAVFDQGVIQQLAPVTELYEYPDNQFVANFIG 240
           +K LH+RLGVT VYVTHDQ EALTMSDRVAVF QG IQQ+A    LYE P N FVANFIG
Sbjct: 184 IKHLHQRLGVTVVYVTHDQGEALTMSDRVAVFHQGEIQQIAAPRTLYEEPKNTFVANFIG 243

Query: 241 DNNRFKGSVESVQGEHCTVRLTDGAALTGLNVHRAHAGQSITACVRPERIRLAAGGSAEP 300
           +NNR  G + S  GE C V L  G  +  L V+    G  +T  VRPER+ L     +  
Sbjct: 244 ENNRLNGRLHSHSGERCVVELARGEKVEALAVNVGQVGGPVTLSVRPERVSLNGSSESCV 303

Query: 301 NSIRASIAGLIYFGDHVRVRCTVAGQEDCFVKLSLS--DPALS 341
           N     +A  IY GDHVRVR  V G+ D FVK  ++  DPAL+
Sbjct: 304 NRFSGRVAEFIYLGDHVRVRLEVCGKADFFVKQPIAELDPALA 346