Pairwise Alignments

Query, 362 a.a., spermidine/putrescine ABC transporter ATPase from Herbaspirillum seropedicae SmR1

Subject, 344 a.a., polyamine ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  261 bits (668), Expect = 1e-74
 Identities = 137/272 (50%), Positives = 188/272 (69%), Gaps = 13/272 (4%)

Query: 8   VQFCGVKKTYDGENLIVKNLDLDIRRGEFLTLLGPSGSGKTTCLMMLAGFEFPTGGEIRL 67
           VQF  V + + GE   V  + +DI+ GEF ++LGPSGSGKTTCL ++AGFE P+ G IR+
Sbjct: 5   VQFTHVSRQF-GEVKAVDRVSIDIQDGEFFSMLGPSGSGKTTCLRLIAGFEQPSAGSIRI 63

Query: 68  DGQLLNRVPPHKRNIGMVFQNYALFPHMTIAQNVAYPLSVRKMDRATREAKVKQALDMVQ 127
            G+    +PP++R++  VFQ+YALFPHM +  NVAY L V+ + +  R  + ++AL MV 
Sbjct: 64  HGEEAAGLPPYQRDVNTVFQDYALFPHMNVRDNVAYGLKVKGVGKTERMNRAEEALGMVA 123

Query: 128 MGKFGDRYPTQLSGGQQQRVALARTLVFDPQLVLMDEPLGALDKQLREHMQLELKALHKR 187
           +G +GDR P QLSGGQ+QRVALAR LV  P+++L+DEPLGALD +LRE MQ ELK L ++
Sbjct: 124 LGGYGDRKPVQLSGGQRQRVALARALVNRPRVLLLDEPLGALDLKLREQMQSELKKLQRQ 183

Query: 188 LGVTFVYVTHDQSEALTMSDRVAVFDQGVIQQLAPVTELYEYPDNQFVANFIGDNNRFKG 247
           LG+TF++VTHDQ+EAL+MSDRVAVF++G I+Q+     LY  P   FVA F+G +N  +G
Sbjct: 184 LGITFIFVTHDQTEALSMSDRVAVFNKGRIEQVDTPRNLYMKPATSFVAEFVGTSNVIRG 243

Query: 248 SVE----------SVQGEHCTVRLTDGAALTG 269
            +           S++ EH  VR  +G   TG
Sbjct: 244 ELAQRLGGTAQPFSIRPEH--VRFAEGPLGTG 273