Pairwise Alignments

Query, 362 a.a., spermidine/putrescine ABC transporter ATPase from Herbaspirillum seropedicae SmR1

Subject, 356 a.a., ABC transporter nucleotide binding/ATPase (putrescine) from Agrobacterium fabrum C58

 Score =  267 bits (683), Expect = 3e-76
 Identities = 144/343 (41%), Positives = 214/343 (62%), Gaps = 4/343 (1%)

Query: 7   LVQFCGVKKTYDGENLIVKNLDLDIRRGEFLTLLGPSGSGKTTCLMMLAGFEFPTGGEIR 66
           +V F  V K+Y G +L V +LDL++  G+F+TLLGPSG GK+T L ML GFE P+ GEI 
Sbjct: 4   VVHFKNVNKSY-GASLAVDDLDLEVAPGQFVTLLGPSGCGKSTTLRMLGGFETPSSGEIY 62

Query: 67  LDGQLLNRVPPHKRNIGMVFQNYALFPHMTIAQNVAYPLSVRKMDRATREAKVKQALDMV 126
           LDGQ ++ +PP++RN+ +VFQ+YALFPH+++ +N+A+ L ++ +D A+   +V + L +V
Sbjct: 63  LDGQPISHLPPNRRNVNIVFQDYALFPHLSVQRNIAFGLELKGLDSASIHRRVMELLGLV 122

Query: 127 QMGKFGDRYPTQLSGGQQQRVALARTLVFDPQLVLMDEPLGALDKQLREHMQLELKALHK 186
           ++  F  R P QLSGGQ+QRVAL R L  DP ++L+DEPL ALD +LR  MQ+ELK++ +
Sbjct: 123 KLQDFAGRMPEQLSGGQRQRVALMRALAPDPNVLLLDEPLSALDAKLRHEMQIELKSIQQ 182

Query: 187 RLGVTFVYVTHDQSEALTMSDRVAVFDQGVIQQLAPVTELYEYPDNQFVANFIGDNNRFK 246
             G TF++VTHDQ EALTMSD V V ++G I+Q+    +LY  P ++FVA+FIG +N   
Sbjct: 183 TTGKTFIFVTHDQEEALTMSDVVVVMNKGRIEQMGAPDDLYARPRSRFVADFIGQSNFLD 242

Query: 247 GSVESVQGEHCTVRLTDGAALTGLNVHRAHAGQSITACVRPERIRLAAGGSAEPNSIRAS 306
           G + S +    TV          LN H    G  +T  +RPE +       ++  +++  
Sbjct: 243 GRLVSAESGVATVDWQGSLIRADLNGHHHAIGSHVTIALRPEALFCLPEQPSDRFALKGQ 302

Query: 307 IAGLIYFGDHVRVRCTVAGQEDCFVKLSLSDPALSGLSEGSSV 349
           I   ++ G H  +  T+       +   L   ALS L +G +V
Sbjct: 303 IERRVFKGAHTTL--TIRLDNGALLSAQLDPVALSHL-DGETV 342