Pairwise Alignments

Query, 294 a.a., AraC family transcriptional regulator from Herbaspirillum seropedicae SmR1

Subject, 301 a.a., helix-turn-helix domain-containing protein from Rhizobium sp. OAE497

 Score = 67.0 bits (162), Expect = 5e-16
 Identities = 61/279 (21%), Positives = 116/279 (41%), Gaps = 17/279 (6%)

Query: 21  HGYPFRTVRWHYHPEYEIHLVVATSGRFYVGDHIGDFAPGQLVMTGPNLPQNWISDIAAD 80
           H +P   V  H+H + E++ V+  +  + + DH      G++ +     P     D ++D
Sbjct: 32  HAHPPVMVMPHWHAQVEVNYVMRGTVHYRMSDHQFSLKAGEMCLFWGGQPHQM--DESSD 89

Query: 81  EMVPVRSLV-------IQFPEQLVDQCAASIAEMEAIMPLLERSHRGLLFDAATSETVRP 133
           + +   + +       ++ P  +  Q       + +     +  +       ATS     
Sbjct: 90  DSIYAGAHLPLVYFFRMRLPVAISSQLMRGATMLTSATDAADNENFARWHRYATSGDPAK 149

Query: 134 LMQRLIDQRGLKRLALFWELLDVLANAPEPEVLASLSYKLDLSGVNSSGLNRAIAYLREH 193
             Q  +D+  L+   +  E   ++         A L+        +S  + R   ++  +
Sbjct: 150 -SQHAVDELLLRIERILLEPYSMIGLG------ADLAENDPPYAQSSRNVARMCDFIAAN 202

Query: 194 LTDDIGEQDLADMVGQNLSSFSRAFKRHTGTTLVRYKNQLRVDLACLALLTRPQARITDI 253
             +DI   D+A     +       FK+ TG TL +Y N LR+  A  A+L   +A +  +
Sbjct: 203 FMEDIDTIDIARAADLHPKYAMNLFKKSTGMTLSKYVNLLRLSRA-QAMLMSEEANVLQV 261

Query: 254 CYETGFSNLSNFNRHFHKIKGMSPSEFRNTFASNGLFAA 292
             ++GF ++S FN+ F  I GMSPS+FR    S+G+  A
Sbjct: 262 AMDSGFGSISAFNKSFRHIAGMSPSDFRRDLRSSGISTA 300