Pairwise Alignments

Query, 359 a.a., sugar ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 318 a.a., Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  174 bits (440), Expect = 4e-48
 Identities = 108/306 (35%), Positives = 172/306 (56%), Gaps = 11/306 (3%)

Query: 36  ALAVLLLIDFLLVPGFFKLEIKDGHLYGALIDIINRAAPLMLAALGMTLVIATRGVDISV 95
           AL +L L+  LL   F  L + +G       +++ + +  +  ++GMTLVI T G+D+SV
Sbjct: 12  ALIILCLVLSLLSDRF--LTLANGW------NVMRQVSVNICISVGMTLVILTAGIDLSV 63

Query: 96  GAVVAISGAVAAILIGGKMVVVDGVSQYVSNVPMVWALCAAMGAALLCGAWNGLLVAGLG 155
           G+++A+ GAV A LI    + V+G++ ++   P+  A+   +G     G +NG  +    
Sbjct: 64  GSILALCGAVTASLIKNG-IAVEGLNLHIGFAPL-GAVILGVGLGFGLGWFNGWTITRFK 121

Query: 156 LQPIIATLILMVAGRGLAQLLTDGQIVTVYYKPFFFLGGGYLFGLPFSLYIAAAMFVLLA 215
           + P +ATL ++   RGL  L T G  +    + F FLG G+  G+P  ++I A +  L  
Sbjct: 122 VPPFVATLAMLTIARGLTMLWTGGFPINGLGEDFAFLGTGWFLGIPMPVWITAVIVALAV 181

Query: 216 LLMKKTALGLFIESVGINPVASRLAGIRTAALIFFVYMFCSACAGLAGLMIASNIKSADA 275
           LL KKT  G ++ ++G N  A+RL+GI  + +   VY      A + G+++ S + SA  
Sbjct: 182 LLTKKTKFGRYVYAIGGNERAARLSGINISRVKMTVYAIAGGLAAVGGMIVTSRLDSAQP 241

Query: 276 NNAGLLLELDAILAVTLGGTSLAGGKFSLVGSVIGALIIQTLTYTIYSLGVPPEVNMVVK 335
            NAG+  ELDAI AV +GGTSL+GGK +++G+V+G +II  L   +  L V P    VVK
Sbjct: 242 -NAGISYELDAIAAVVIGGTSLSGGKGTIMGAVLGGIIIGVLNNGLVLLNVSPFWQQVVK 300

Query: 336 SIVVFL 341
             V+ L
Sbjct: 301 GAVILL 306