Pairwise Alignments

Query, 278 a.a., sugar ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 276 a.a., carbohydrate ABC transporter permease from Rhizobium sp. OAE497

 Score =  130 bits (327), Expect = 3e-35
 Identities = 73/276 (26%), Positives = 137/276 (49%), Gaps = 14/276 (5%)

Query: 13  KSLTRLLVMLLYIAFTL-----VPLYWLLNTSLKTNEETLS-----VFTLWPNAPTLNNY 62
           K  T+  V++  IA+TL      P+ W   TS K+  + ++     +F  W    T  NY
Sbjct: 4   KVTTQRKVIMTAIAWTLGILIFFPILWTFLTSFKSEADAIASPPQFLFFHW----TTENY 59

Query: 63  KTIFTDPSWYSGYINSIIYVAMNTVMSLLVALPAAYAFSRYRFLGDKHMFFWLLTNRMTP 122
             + +  ++   ++NS+I    +T++ L++A+PAA+A +       K +  W+L+ +M P
Sbjct: 60  SEVQSRSNYLGHFMNSVIISFGSTLLGLIIAIPAAWAMAFSPTKRTKDVLMWMLSTKMMP 119

Query: 123 PAVFLLPFFQLYSTIGLSDTHIAVALAHMLFNVPLAVWILEGFMSGVPREIDETAYIDGF 182
           P   L+P + ++   GL D+   + +   L N+P+ VW+L  +   +P EI E A +DG 
Sbjct: 120 PVGALIPIYLMFRNSGLLDSRFGLVIVLTLINLPIIVWMLYTYFKEIPGEILEAARMDGA 179

Query: 183 SFPRFFLRIFLPLIKSGVGVTAFFCFMFSWVELLLARTLTSVNAKPISAIMTRTASAAGM 242
           S  +  + +  P+   G+  T     + +W E      L++  A P++A +   +S  G+
Sbjct: 180 SLAKEIIYVLTPMAVPGIASTLLLNIILAWNEAFWTLNLSASKAAPLTAFIASYSSPEGL 239

Query: 243 DWGILAAAGVLTIVPGALVIWFVRNHIAKGFAMGRV 278
            +  L+AA  + I P  ++ WF +  + +G   G V
Sbjct: 240 FYAKLSAASTMAIAPILILGWFSQKQLVRGLTFGAV 275