Pairwise Alignments

Query, 307 a.a., baseplate assembly protein from Herbaspirillum seropedicae SmR1

Subject, 326 a.a., Pyocin R2_PP, baseplate/tail fiber protein from Pseudomonas putida KT2440

 Score =  193 bits (491), Expect = 4e-54
 Identities = 123/330 (37%), Positives = 179/330 (54%), Gaps = 39/330 (11%)

Query: 5   IDLTLLPAPQVLETLDFETILATRKAAVLALLPEDQRDAAAKVLALESEPSTKLLQENAY 64
           IDL+LLP P V+E++DFE +        L +  E  +D      ALES+P  KL++  AY
Sbjct: 2   IDLSLLPPPDVVESVDFEELYQE----TLGIFREFMKDQWTA--ALESDPVVKLMEVMAY 55

Query: 65  QELLLRNRVNDAAKAIMLAFAMDSDLDQIGANNNVKRLVLVPADPDAQPPVAEVLEGDDA 124
           +E+L R RVN AAKA +LAFA  +DL    A+  V++LV+ PADPDA PPV  V+EGD+A
Sbjct: 56  REMLTRARVNAAAKASLLAFAKGNDLVNRAADYGVEKLVIRPADPDAVPPVEAVMEGDEA 115

Query: 125 YRLRIQEAPDALSVAGPRNAYEFHARSADGRV---------------------------- 156
            R R + + +ALSVAG   AYE+H  SA   +                            
Sbjct: 116 LRYRTRLSLEALSVAGSSGAYEYHGLSASAELTNVSVDSPRFVEAELTPEVRAQLPAGAI 175

Query: 157 -----MDARAISPAPCEVVVAVLANTEDWQAPADLLATVDAALSAEDVRPLGDLVNVVQG 211
                 DA   +P P +V +A+L +       A L+A V AALSAE+VRP+ D   V  G
Sbjct: 176 VVVCDYDAGLANPLPGDVSLAILPSLSSTTPVAQLVAKVKAALSAEEVRPITDRPRVAAG 235

Query: 212 AVTDYELEAVVYVEKGPEAAIALNAARANAAAISKPLRPLGYSVYRNAYVAALKVEGVRN 271
             T++++EA + +E+GP+  +    ARA   A     R L   +  +A  AAL V G+R+
Sbjct: 236 VPTEFKVEAELQIEEGPDPDVVKATARAGLNAAIAEARRLQGQLPLSAIYAALHVTGIRS 295

Query: 272 VIVKSPAADILCGRTQAARCTAIRIKAEVL 301
           V +K PAA ++C +     CT++ + ++V+
Sbjct: 296 VTLKHPAAGVVCDKRHYPSCTSVTLTSKVV 325