Pairwise Alignments

Query, 426 a.a., C4-dicarboxylate ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 427 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  307 bits (786), Expect = 5e-88
 Identities = 153/416 (36%), Positives = 253/416 (60%)

Query: 1   MNALIIFVLLFALMLTGMPISISLGLTVLTFLFTMTEVPIQSVALKLFTGIEKFEIMAIP 60
           M   I    L A M  G+PIS +L L+ +  ++ M     Q +A  L  G   F ++A+P
Sbjct: 1   MTIAIFLGTLLAAMAIGVPISFALLLSGVGLMWHMGMFDAQILAQNLTEGANSFPLLAVP 60

Query: 61  FFILAGNFLTHGGVARRMINFATSMVGHWHGGLALAGVLACALFAAVSGSSPATVVAIGS 120
           FF+LAG  +  GG++RR++NFA ++VGH  GGL    ++A  L +A+SGS+ A   A+ +
Sbjct: 61  FFMLAGEIMNTGGLSRRIVNFAMALVGHVRGGLGYVTIVAACLLSALSGSAVADAAALTA 120

Query: 121 IILPAMVKQGFPNRFGAGVITTSGALGILIPPSIVMVMYSVSTNTSVGKLFMAGVVPGLL 180
           ++LP MVK G       G+I   G +G +IPPSI  V++ V+ N S+ KLF+AG+ PG+L
Sbjct: 121 LLLPMMVKAGHDKARSGGLIAACGVIGPIIPPSIGFVIFGVAANVSISKLFLAGIFPGIL 180

Query: 181 LAFLLGVTTWFLARKNNYPRLKKATWAERAAAFRKSGWGLFLIVIVMGGIYTGVFTPTEA 240
           LA  L  T W+  R+       + +  E  AA R +GW L L +I++ G+  GVFTPTEA
Sbjct: 181 LAAGLWATWWWTTRREKLEPPPRKSAREVIAAMRSAGWALMLPLIILVGLRMGVFTPTEA 240

Query: 241 AAMAAVYAFFIAVFVYKDLTLKQVPKVLLDSASMSAMLLYIITNAVLFSFLVTSENIPQA 300
           A +AAVYA F+A  +Y++LT+KQ+ +V L++A  +A++++++  A++ ++L+T   +P  
Sbjct: 241 AVVAAVYALFVAGVIYRELTVKQLYEVFLNAAKTTAVIMFLVAAAMVSAWLITVAQLPDQ 300

Query: 301 MAAWITDSGLGPITFLLVVNILLLLAGNVMEPSSIVLILAPILFPVAMKLGIDPVHFGIL 360
           + A +      P+  +  + +L++  G  M+ +  +LIL P+L P+    GIDPV+FG+L
Sbjct: 301 IVALLQPLLDSPMLLMFAIMLLVIAVGTAMDMTPTILILTPVLMPLVKAAGIDPVYFGVL 360

Query: 361 IVVNMEVGMCHPPVGLNLYVASGITKMGITELTIAVMPWLLTMLGFLALVTYWPAL 416
            ++N  +G+  PPVG  L   +G+ +M + ++T  VMP++L     + L+  +P+L
Sbjct: 361 FIINNSIGLVTPPVGTVLNTVAGVGRMRMDDVTRGVMPFMLVQFAVMFLLVLFPSL 416