Pairwise Alignments

Query, 220 a.a., membrane protein from Herbaspirillum seropedicae SmR1

Subject, 218 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score =  223 bits (569), Expect = 2e-63
 Identities = 105/197 (53%), Positives = 149/197 (75%), Gaps = 1/197 (0%)

Query: 7   LDVLVHVDKYLGVLIEQYGALIYAVLFLIVFCETGLVVLPFLPGDSLLFIAGTFCATGAM 66
           LD+++H+D YL +L+  YG  IYA+LFL++FCETGLVV+PFLPGDSLLFIAG   A G M
Sbjct: 6   LDLILHLDVYLDLLVTNYGPWIYAILFLVIFCETGLVVMPFLPGDSLLFIAGAVAAGGGM 65

Query: 67  DIWLLMTLLVVAAVAGNTLNYWIGGWVGQRVYTH-NYRWLNPEALRKTHAFYEKHGGKTI 125
           D  LL  LL++AA+ G++ NY IG   G+R++++ N +    + L+KTH FY+KHGGKT+
Sbjct: 66  DPVLLAGLLMLAAILGDSTNYVIGRTAGERLFSNPNSKIFRRDYLQKTHDFYDKHGGKTV 125

Query: 126 VIARFTPIVRTFAPFIAGVSAMSFARFQLFNVLGAFLWVVGLVVLGYLFGNIPVVQQNLN 185
            +ARF PI+RTFAPF+AG++ M + RF  F+V G  LWV GLV LGY FGN+P +++NL+
Sbjct: 126 TLARFLPILRTFAPFVAGIAKMPYPRFFGFSVFGTILWVGGLVTLGYFFGNVPFIKKNLS 185

Query: 186 TLVLIGIVAAVFPIVLG 202
            LV+  I+ ++ P+++G
Sbjct: 186 LLVVFIILLSLVPMIIG 202