Pairwise Alignments

Query, 448 a.a., type VI secretion protein from Herbaspirillum seropedicae SmR1

Subject, 454 a.a., hypothetical protein from Acinetobacter radioresistens SK82

 Score =  389 bits (1000), Expect = e-113
 Identities = 202/450 (44%), Positives = 297/450 (66%), Gaps = 9/450 (2%)

Query: 4   SNKVLWGEGLFLRPQHFQRQDLYHETRLRQTASALHPYCWGVSALQVDRDALNNNTLRIL 63
           + KVLWGEGLFLRPQHFQ QD YHE RL  T  A  P+ +G+  LQ D   L+ + L + 
Sbjct: 4   AEKVLWGEGLFLRPQHFQLQDSYHEQRLNHTIRATIPFAYGIQKLQFDEVQLSTHVLALE 63

Query: 64  ELSLIFQDGEIYKAPDGDDLPDPIELGEIALTQQSVTFYAALPAMKSFGSNFAQAAGGNQ 123
            + +I+QDGEIY+AP  D LP P+ L E++L  + +T Y ALP +++   N +     +Q
Sbjct: 64  NIEMIWQDGEIYQAPAQDLLPAPVLLDELSLRGE-MTIYLALPILQANKKNVSDEQA-SQ 121

Query: 124 SNRYLLDNSETPDLFTEAAKAEMSYLKKAVRL------VSENEPRDSLVCIPIVRLRRSN 177
           S+RY     ET DLFT A  A+++ L++          V  N+  +  + +P+ +L+R +
Sbjct: 122 SSRYHDYLVETHDLFTTAMPADITLLRRRAEFKLLETHVHPNQELEGFLYLPVGKLKRQS 181

Query: 178 SSGFEMDPNFVPPSLSVHAAPLLLLRLRRLMDALQAKVSALYGHHREPSKSVVEFRSGDI 237
           S  FE+D  F+PP L V A+  L+  LRR ++ ++AK+  +  ++RE  + ++EFRSGDI
Sbjct: 182 SGIFELDRKFIPPILQVEASETLISNLRRTLNIIKAKIKTIQNNNRENEQKLIEFRSGDI 241

Query: 238 TSFWLLHTASTAYASLSHYLHNPLLHPERLYEQLLTLGGSLMTFSRSVALADLPAYDHQD 297
            SFWL++  +TA+A L+H L NP +HPERL+ +LL L GSL+TFS +  +  LP Y H  
Sbjct: 242 VSFWLVNALNTAHAGLNHLLQNPQVHPERLFFELLRLTGSLLTFSTAYEVDHLPQYKHHQ 301

Query: 298 PGPAFARLDGIIRELLDTVISSRYFAIALNETKPSYHLGMLDSGKIDEKTNFYLAVNAD- 356
              +F +LD I+R+LLDT+IS+RY +IAL E +PSY LG L+S KI+  T  Y+AV++  
Sbjct: 302 LQESFQQLDVILRDLLDTIISNRYISIALKEIRPSYWLGSLESDKINRDTRLYIAVSSSM 361

Query: 357 LPAIELVDVVPLRFKIGAPDDVEKFVLAALPGVKLVHSPQVPAALPVRPDTYYFALENKG 416
           +   EL+ +VPLRFK+G+  DVE+ V+AALP + L H  QVP A+PVR    YF +E   
Sbjct: 362 MQTHELIQIVPLRFKVGSTVDVEQRVVAALPAIPLHHLVQVPTAIPVRSGVSYFEIEAHH 421

Query: 417 AMYERMLQAQSICIYVPAGIRDLKLELLAV 446
            +Y+RM+++++ICIYVPAG +D+ +EL+AV
Sbjct: 422 ELYQRMIESEAICIYVPAGFQDISIELIAV 451