Pairwise Alignments

Query, 265 a.a., IclR family transcriptional regulator from Herbaspirillum seropedicae SmR1

Subject, 271 a.a., DNA-binding transcriptional repressor (NCBI) from Escherichia coli BW25113

 Score =  100 bits (250), Expect = 2e-26
 Identities = 67/236 (28%), Positives = 115/236 (48%), Gaps = 2/236 (0%)

Query: 8   PDDAARIA--GTAAFSKFMVVLQLIADQDAPLNIAQLAALSGYPRPTVYRILAALMAEGM 65
           P  A  +A  G  A  + + +LQ +       +++ ++     P  T +R+L  L A   
Sbjct: 10  PGQAEPVAQKGAQALERGIAILQYLEKSGGSSSVSDISLNLDLPLSTTFRLLKVLQAADF 69

Query: 66  VVENPRNKQYEVGPRLINLASRAWDRSDIRTTAIESLRQLRDLTRETVHLAVPSDHSMVY 125
           V ++ +   + +G  + N+ +      D+ + A   +R+L  L+ ETV++A+ + +  V 
Sbjct: 70  VYQDSQLGWWHIGLGVFNVGAAYIHNRDVLSVAGPFMRRLMLLSGETVNVAIRNGNEAVL 129

Query: 126 IEKLESPQAVRMDSRIGTRVTLYSSSVGKAYLAGLEEAHRERLMRTLHLQAFTANTHTEL 185
           I +LE    VRM + +G+R+ L++S  GKA L  L E     ++    LQ FT  T  ++
Sbjct: 130 IGQLECKSMVRMCAPLGSRLPLHASGAGKALLYPLAEEELMSIILQTGLQQFTPTTLVDM 189

Query: 186 AALRADVEDTRARGYAEDREENEAQIFCYGAAIVGADGVPVACVSVSIPLYRRLPD 241
             L  D+E  R  GY  D+EE+   + C  +AI    G  VA +S+S P  R   D
Sbjct: 190 PTLLKDLEQARELGYTVDKEEHVVGLNCIASAIYDDVGSVVAAISISGPSSRLTED 245