Pairwise Alignments

Query, 523 a.a., chemotaxis protein from Herbaspirillum seropedicae SmR1

Subject, 506 a.a., fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component (NCBI) from Escherichia coli BW25113

 Score =  363 bits (931), Expect = e-104
 Identities = 209/513 (40%), Positives = 320/513 (62%), Gaps = 15/513 (2%)

Query: 7   ITTTERLLEDGKSIVSKTDLQGNILYVNPYFIEISGFEEEELIGAPQNIVRHPEMPREAF 66
           +T     L D  +++S TDLQ  I + N  F+++SG+  +EL G P N+VRHP+MP+ AF
Sbjct: 7   VTQQNTPLADDTTLMSTTDLQSYITHANDTFVQVSGYTLQELQGQPHNMVRHPDMPKAAF 66

Query: 67  ADMWATLKEGLPWNGLVKNRCKNGDYYWVQANVTPVRENGRAVGYMSVRTRPSREQVQAA 126
           ADMW TLK+G PW+G+VKNR KNGD+YWV+AN  P+   G+  GYMS+RTR + E++ A 
Sbjct: 67  ADMWFTLKKGEPWSGIVKNRRKNGDHYWVRANAVPMVREGKISGYMSIRTRATDEEIAAV 126

Query: 127 EAAYRKFSAGQARGLRVHRGAVVRTGLTGWLQGLRELPVARRLGWTMGVLTLMFILGGAV 186
           E  Y+  +AG+    R+H+G VVR G   WL  L  LP+  R     GV+TLMFIL  A+
Sbjct: 127 EPLYKALNAGRT-SKRIHKGLVVRKG---WLGKLPSLPLRWR---ARGVMTLMFILLAAM 179

Query: 187 AGNAVMSAGGSPFAVWLGTAAGALMLLASWAMLHASIVAPLQRAIKAVHGLAGGDLDSHI 246
                     +P   ++     AL++L + A     IV P++        +A G+ +S  
Sbjct: 180 LWFVA-----APVVTYI---LCALVVLLASACFEWQIVRPIENVAHQALKVATGERNSVE 231

Query: 247 DTTARGDMGLLLQALQQLNVNLRAIIGDVRRNVESMTISTGEIANGNMDLSGRTEAQASA 306
                 ++GL L+A+ QL +  R +I DV   V S+   +  +A G  +L+  T+     
Sbjct: 232 HLNRSDELGLTLRAVGQLGLMCRWLINDVSSQVSSVRNGSETLAKGTDELNEHTQQTVDN 291

Query: 307 LEETASSVEEFAATVRQNADSAANADRQAQSASAIAQRGGSSVQRMGRTMEEIDAASHKI 366
           +++T +++ + AA+V+QN+ +A+ AD+ + +AS  A +GG ++  + +TM++I  ++ +I
Sbjct: 292 VQQTVATMNQMAASVKQNSATASAADKLSITASNAAVQGGEAMTTVIKTMDDIADSTQRI 351

Query: 367 VDIIGLIDGISFQTNILALNAAVEAARAGEQGRGFAVVAAEVRTLAQRSAAAAKDIKGLI 426
             I  LI+ I+FQTNILALNAAVEAARAGEQG+GFAVVA EVR LA RSA AA DI+ LI
Sbjct: 352 GTITSLINDIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRHLASRSANAANDIRKLI 411

Query: 427 DDSRAKVESGNQLVRETAQAMGELGGAVENMAVTMAEITVASNEQSGGIEQLNQAVNAID 486
           D S  KV+SG+Q V    + M ++   V+N+   +A+I+ ++ EQ+ G+  L +AV+ ++
Sbjct: 412 DASADKVQSGSQQVHAAGRTMEDIVAQVKNVTQLIAQISHSTLEQADGLSSLTRAVDELN 471

Query: 487 ETTQQNAALVEQAAAAAENLRDQAVKLSQAVSV 519
             TQ+NA LVE++A  +  ++ +A +L  AV+V
Sbjct: 472 LITQKNAELVEESAQVSAMVKHRASRLEDAVTV 504