Pairwise Alignments

Query, 618 a.a., ATP-dependent DNA helicase RecQ from Herbaspirillum seropedicae SmR1

Subject, 605 a.a., ATP-dependent DNA helicase RecQ from Xanthobacter sp. DMC5

 Score =  691 bits (1783), Expect = 0.0
 Identities = 352/595 (59%), Positives = 438/595 (73%), Gaps = 2/595 (0%)

Query: 18  LHVLETVFGYSSFRGHQGEIVQHVAGGGDALVLMPTGGGKSLCYQVPALLRQGTGVVISP 77
           L VL  VFGY +FRG Q EIV+HV  GGDALVLMPTGGGKSLCYQVPAL+R GTG+V+SP
Sbjct: 11  LEVLRHVFGYEAFRGRQREIVEHVVAGGDALVLMPTGGGKSLCYQVPALVRPGTGIVVSP 70

Query: 78  LIALMQDQVDALDEVGVRAAFLNSTQSFDEAMQIERRLRQGDLDLLYVAPERLMTPRCLD 137
           LIALM DQV AL ++GV+AA LNS+ +  E  Q+ER L  GDLDLLYVAPERL+T   L+
Sbjct: 71  LIALMHDQVQALRQLGVKAAMLNSSLAPGEGRQVERALAMGDLDLLYVAPERLLTDGFLN 130

Query: 138 LLESARISLFAIDEAHCVSQWGHDFRPEYIKLSVLHERFPQVPRIALTATADQQTREEII 197
           LL+ ARISLFAIDEAHCVSQWGHDFRPEY +L++LHER+P VPR+ALTATAD  TR EI+
Sbjct: 131 LLDGARISLFAIDEAHCVSQWGHDFRPEYRQLTILHERYPGVPRMALTATADGPTRREIV 190

Query: 198 HRLQLEDARQFVSSFDRPNIRYQIVEKANGRKQLLDFIKSEHPEDAGIVYCLSRKKVEET 257
            RL LE+ + F+SSFDRPNIRY+I  KAN R QL  F+ + H  +AGI+YC+SR KVE T
Sbjct: 191 ERLNLEEGQVFLSSFDRPNIRYRIAPKANPRVQLKAFLDA-HDGEAGIIYCMSRAKVEAT 249

Query: 258 ADFLRSEGINALAYHAGMDYAQRTANQARFLREDKIVMVATIAFGMGIDKPDVRFVCHLD 317
           A+ L +EG  AL YHAG+D   R  +Q RFL+E+ +VMVATIAFGMGIDKPDVRFV HLD
Sbjct: 250 AEMLSTEGRTALPYHAGLDADTRARHQDRFLKEEGVVMVATIAFGMGIDKPDVRFVVHLD 309

Query: 318 LPKSVEGYYQETGRAGRDGLPADAWMAYGLQDVVQQRRMIDESDADETFKRVLGTKLNAM 377
           LPKS+E YYQETGRAGRDGLP++  + YG++DV +  + +D SDA E  KRV  +KL+A+
Sbjct: 310 LPKSIEAYYQETGRAGRDGLPSETLLLYGVEDVAKLIQFVDGSDAPEARKRVERSKLDAL 369

Query: 378 LALCETLHCRRVHLLDYFGEK-SAPCGNCDTCLTPPVSFDATVEVQKLLSTVYRVEQRFA 436
           L L ET  CRR  LL YF E    PCGNCDTCL PP +FD T   QKLLS VYR  +RF 
Sbjct: 370 LGLAETASCRRQVLLKYFEEDLPQPCGNCDTCLNPPRTFDGTEAAQKLLSCVYRTGERFG 429

Query: 437 PGHVIEVLRGIDGERVKQWRHDQLSVFGVGSDRGEAEWRAILRQVIALGLLTVDADNYSA 496
            GHVI+VLRG   ++V ++ HD+LS FG+G +    EWRA++RQ++A+G L VD + + +
Sbjct: 430 AGHVIDVLRGDANDKVTKFGHDKLSTFGIGGNFSRDEWRAVVRQLVAMGYLWVDVEGHGS 489

Query: 497 LKLTEAARPVLRGEQAVQLRRYQKPEKAKRSSQRSSFVETDLSTEEQALFEKLRWWRVET 556
           L LTE  RPVLRGE+ V+L+   +P  A+ +              ++ALF+KL+  R+E 
Sbjct: 490 LGLTEKCRPVLRGEERVELKAEARPRAARVTGGGRGPSAALADPADEALFQKLKKLRLEL 549

Query: 557 ARAHNVPAYVIFHDATMREIAKARPQSLDDLRHVTGVGEKKLETYGAQIIALIAE 611
           ARA  VP YVIFHD T+  IA+ +P S+  L  ++G+GE KL  YG Q + +IAE
Sbjct: 550 ARAQGVPPYVIFHDTTLMAIAELKPTSMKALGMISGIGEAKLMRYGQQFLQVIAE 604