Pairwise Alignments

Query, 618 a.a., ATP-dependent DNA helicase RecQ from Herbaspirillum seropedicae SmR1

Subject, 621 a.a., ATP-dependent DNA helicase RecQ from Erwinia amylovora T8

 Score =  558 bits (1437), Expect = e-163
 Identities = 296/593 (49%), Positives = 390/593 (65%), Gaps = 7/593 (1%)

Query: 20  VLETVFGYSSFRGHQGEIVQHVAGGGDALVLMPTGGGKSLCYQVPALLRQGTGVVISPLI 79
           VL   FGY  FR  Q  I+Q    G D LV+MPTGGGKSLCYQ+PAL+RQG  +V+SPLI
Sbjct: 27  VLRDTFGYQQFRPGQQTIIQESLNGRDCLVVMPTGGGKSLCYQIPALVRQGLTLVVSPLI 86

Query: 80  ALMQDQVDALDEVGVRAAFLNSTQSFDEAMQIERRLRQGDLDLLYVAPERLMTPRCLDLL 139
           +LM+DQVD L   GV AA LNSTQ+ +E   +    R G + LLY+APERLM    L+ L
Sbjct: 87  SLMKDQVDQLLANGVAAACLNSTQNREEQQNVMAGCRSGKVRLLYIAPERLMMDNFLEQL 146

Query: 140 ESARISLFAIDEAHCVSQWGHDFRPEYIKLSVLHERFPQVPRIALTATADQQTREEIIHR 199
                ++ A+DEAHC+SQWGHDFRPEY  L  L +R P VP +ALTATAD+ TR +I   
Sbjct: 147 THCNPAMLAVDEAHCISQWGHDFRPEYGALGQLRQRLPDVPVMALTATADETTRNDIARL 206

Query: 200 LQLEDARQFVSSFDRPNIRYQIVEKANGRKQLLDFIKSEHPEDAGIVYCLSRKKVEETAD 259
           LQL D    +SSFDRPNIRY +VEK    +QLL +++ +  +  GI+YC SR KVE+TA 
Sbjct: 207 LQLNDPLIQISSFDRPNIRYTLVEKFKPTEQLLRYVQDQRGK-CGIIYCNSRAKVEDTAA 265

Query: 260 FLRSEGINALAYHAGMDYAQRTANQARFLREDKIVMVATIAFGMGIDKPDVRFVCHLDLP 319
            L+S G++  AYHAGMD A R   Q  F R+D  ++VAT+AFGMGI+KP+VRFV H D+P
Sbjct: 266 RLQSRGLSVGAYHAGMDNAHRAQVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIP 325

Query: 320 KSVEGYYQETGRAGRDGLPADAWMAYGLQDVVQQRRMIDESDADETFKRVLGTKLNAMLA 379
           +++E YYQETGRAGRDGLPA+A + Y   D+   RR ++E       + +   KLNAM A
Sbjct: 326 RNIESYYQETGRAGRDGLPAEALLLYDPADMAWLRRCLEEK-KQGPLQDIERHKLNAMGA 384

Query: 380 LCETLHCRRVHLLDYFGE-KSAPCGNCDTCLTPPVSFDATVEVQKLLSTVYRVEQRFAPG 438
             E   CRR+ LL+YFGE +   C NCD CL PP  +D  VE QK LS +YRV QRF  G
Sbjct: 385 FAEAQTCRRLVLLNYFGEGRQQACDNCDICLDPPRRYDGLVEAQKALSCIYRVGQRFGMG 444

Query: 439 HVIEVLRGIDGERVKQWRHDQLSVFGVGSDRGEAEWRAILRQVIALGLLTVDADNYSALK 498
           +++E+LRG + +R++  +HD+L V+G+G D+    W ++LRQ+I LGL+T +   YSAL+
Sbjct: 445 YIVEILRGANNQRIRDMQHDKLPVYGIGRDQNHEHWTSVLRQLIHLGLVTQNIAMYSALQ 504

Query: 499 LTEAARPVLRGEQAVQLRRYQKPEKAKRSSQRSSFVETDLSTEEQALFEKLRWWRVETAR 558
           LTEAARPVLRGE ++ L   +      R S + SF        ++ LF KLR  R   A 
Sbjct: 505 LTEAARPVLRGEVSLLLAVPRLVSVKTRGSSQKSFG----GNYDRKLFAKLRKLRKAIAD 560

Query: 559 AHNVPAYVIFHDATMREIAKARPQSLDDLRHVTGVGEKKLETYGAQIIALIAE 611
             N+P YV+F+DAT+ E+A+  P +  ++  V GVG KKLE +G   + +I E
Sbjct: 561 EDNLPPYVVFNDATLIEMAEQMPITASEMLSVNGVGHKKLERFGKPFLLMIKE 613