Pairwise Alignments

Query, 618 a.a., ATP-dependent DNA helicase RecQ from Herbaspirillum seropedicae SmR1

Subject, 607 a.a., ATP-dependent DNA helicase RecQ from Erwinia tracheiphila SCR3

 Score =  556 bits (1434), Expect = e-163
 Identities = 292/593 (49%), Positives = 392/593 (66%), Gaps = 8/593 (1%)

Query: 20  VLETVFGYSSFRGHQGEIVQHVAGGGDALVLMPTGGGKSLCYQVPALLRQGTGVVISPLI 79
           VL+  FGY  FR  Q  I+Q    G D LV+MPTGGGKSLCYQ+PAL R G  +V+SPLI
Sbjct: 16  VLQETFGYQQFRPGQQTIIQASLEGRDCLVVMPTGGGKSLCYQIPALARDGLTLVVSPLI 75

Query: 80  ALMQDQVDALDEVGVRAAFLNSTQSFDEAMQIERRLRQGDLDLLYVAPERLMTPRCLDLL 139
           +LM+DQVD L   GV AA LNSTQ+ +E   +    R G + LLY+APERLM    LD L
Sbjct: 76  SLMKDQVDQLLANGVSAACLNSTQTREEQQGVMACCRTGRIKLLYIAPERLMMDNFLDSL 135

Query: 140 ESARISLFAIDEAHCVSQWGHDFRPEYIKLSVLHERFPQVPRIALTATADQQTREEIIHR 199
               + + A+DEAHC+SQWGHDFRPEY  L  L +R P VP +ALTATAD+ TR +I+  
Sbjct: 136 LHWNLVMLAVDEAHCISQWGHDFRPEYGALGQLRQRLPYVPVMALTATADETTRNDIVRL 195

Query: 200 LQLEDARQFVSSFDRPNIRYQIVEKANGRKQLLDFIKSEHPEDAGIVYCLSRKKVEETAD 259
           LQL D    +SSFDRPNIRY +VEK    +QLL +++ +  +  GI+YC SR KVE+TA 
Sbjct: 196 LQLHDPLIQISSFDRPNIRYTLVEKFKPTEQLLRYVQDQRGK-CGIIYCNSRAKVEDTAA 254

Query: 260 FLRSEGINALAYHAGMDYAQRTANQARFLREDKIVMVATIAFGMGIDKPDVRFVCHLDLP 319
            L+S G++  AYHAGMD   R   Q  F R+D  ++VAT+AFGMGI+KP+VRFV H D+P
Sbjct: 255 RLQSRGLSVGAYHAGMDNVHRAQVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIP 314

Query: 320 KSVEGYYQETGRAGRDGLPADAWMAYGLQDVVQQRRMIDESDADETFKRVLGTKLNAMLA 379
           +++E YYQETGRAGRDGLPA+A M Y   D+   RR ++E       +++   KLNAM A
Sbjct: 315 RNIESYYQETGRAGRDGLPAEAMMLYDPADMAWLRRCLEEKPG--PLQQIESHKLNAMGA 372

Query: 380 LCETLHCRRVHLLDYFGE-KSAPCGNCDTCLTPPVSFDATVEVQKLLSTVYRVEQRFAPG 438
             E   CRR+ LL+YFGE +   CGNCD CL PP  +D  VE QK LS++YRV QRF  G
Sbjct: 373 FAEAQTCRRLVLLNYFGEGRQLACGNCDICLDPPRRYDGLVEAQKALSSIYRVGQRFGMG 432

Query: 439 HVIEVLRGIDGERVKQWRHDQLSVFGVGSDRGEAEWRAILRQVIALGLLTVDADNYSALK 498
           +++E+LRG + +R++  +HD+L V+G+G D+    W ++LRQ+I LGL+T +   +SAL+
Sbjct: 433 YIVEILRGANSQRIRDMQHDKLPVYGIGRDQSHEHWISVLRQLIHLGLVTQNISMHSALQ 492

Query: 499 LTEAARPVLRGEQAVQLRRYQKPEKAKRSSQRSSFVETDLSTEEQALFEKLRWWRVETAR 558
           LTEAARPVLRGE  + L   +      R + + SF        ++ LF +LR  R   A 
Sbjct: 493 LTEAARPVLRGETPLMLAVPRMVSARPRYNSQKSFG----GNYDRKLFARLRKLRKAIAD 548

Query: 559 AHNVPAYVIFHDATMREIAKARPQSLDDLRHVTGVGEKKLETYGAQIIALIAE 611
             N+P YV+F+DAT+ E+A+  P +  ++  + GVG++KLE +G   + +I E
Sbjct: 549 EENIPPYVVFNDATLIEMAEQMPLTASEMLSINGVGQRKLERFGKPFMLVIRE 601