Pairwise Alignments

Query, 618 a.a., ATP-dependent DNA helicase RecQ from Herbaspirillum seropedicae SmR1

Subject, 611 a.a., ATP-dependent DNA helicase RecQ from Escherichia fergusonii Becca

 Score =  555 bits (1431), Expect = e-162
 Identities = 293/594 (49%), Positives = 398/594 (67%), Gaps = 8/594 (1%)

Query: 17  ALHVLETVFGYSSFRGHQGEIVQHVAGGGDALVLMPTGGGKSLCYQVPALLRQGTGVVIS 76
           A  VL+  FGY  FR  Q EI+  V  G D LV+MPTGGGKSLCYQ+PALL  G  VV+S
Sbjct: 15  AKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVS 74

Query: 77  PLIALMQDQVDALDEVGVRAAFLNSTQSFDEAMQIERRLRQGDLDLLYVAPERLMTPRCL 136
           PLI+LM+DQVD L   GV AA LNSTQ+ ++ +++    R G + LLY+APERLM    L
Sbjct: 75  PLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLMLDNFL 134

Query: 137 DLLESARISLFAIDEAHCVSQWGHDFRPEYIKLSVLHERFPQVPRIALTATADQQTREEI 196
           + L      L A+DEAHC+SQWGHDFRPEY  L  L +RFP +P +ALTATAD  TR++I
Sbjct: 135 EHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTATADDTTRQDI 194

Query: 197 IHRLQLEDARQFVSSFDRPNIRYQIVEKANGRKQLLDFIKSEHPEDAGIVYCLSRKKVEE 256
           +  L L D    +SSFDRPNIRY ++EK     QL+ +++ +  + +GI+YC SR KVE+
Sbjct: 195 VRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGK-SGIIYCNSRAKVED 253

Query: 257 TADFLRSEGINALAYHAGMDYAQRTANQARFLREDKIVMVATIAFGMGIDKPDVRFVCHL 316
           TA  L+S+GI+A AYHAG++   R   Q +F R+D  ++VAT+AFGMGI+KP+VRFV H 
Sbjct: 254 TAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHF 313

Query: 317 DLPKSVEGYYQETGRAGRDGLPADAWMAYGLQDVVQQRRMIDESDADETFKRVLGTKLNA 376
           D+P+++E YYQETGRAGRDGLPA+A + Y   D+   RR ++E    +  + +   KLNA
Sbjct: 314 DIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQ-LQDIERHKLNA 372

Query: 377 MLALCETLHCRRVHLLDYFGE-KSAPCGNCDTCLTPPVSFDATVEVQKLLSTVYRVEQRF 435
           M A  E   CRR+ LL+YFGE +  PCGNCD CL PP  +D + + Q  LST+ RV QRF
Sbjct: 373 MGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQIALSTIGRVNQRF 432

Query: 436 APGHVIEVLRGIDGERVKQWRHDQLSVFGVGSDRGEAEWRAILRQVIALGLLTVDADNYS 495
             G+V+EV+RG + +R++ + HD+L V+G+G D+    W +++RQ+I LGL+T +   +S
Sbjct: 433 GMGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIHLGLVTQNIAQHS 492

Query: 496 ALKLTEAARPVLRGEQAVQLRRYQKPEKAKRSSQRSSFVETDLSTEEQALFEKLRWWRVE 555
           AL+LTEAARPVLRGE ++QL    +    K  + + SF        ++ LF KLR  R  
Sbjct: 493 ALQLTEAARPVLRGESSLQL-AVPRIVALKPKAMQKSFG----GNYDRKLFAKLRKLRKS 547

Query: 556 TARAHNVPAYVIFHDATMREIAKARPQSLDDLRHVTGVGEKKLETYGAQIIALI 609
            A   NVP YV+F+DAT+ E+A+  P +  ++  V GVG +KLE +G   +ALI
Sbjct: 548 IADESNVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALI 601