Pairwise Alignments

Query, 165 a.a., transcriptional activator from Herbaspirillum seropedicae SmR1

Subject, 181 a.a., Transcription antitermination protein NusG from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 40.8 bits (94), Expect = 1e-08
 Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 6/140 (4%)

Query: 19  NLEQQGYECYLPLLHKEKVRRGALTLSSEALFPRYLFIRLGAGLTSKSWAPIRSTKGVSR 78
           N+E+   E  +P     ++R G    S    FP Y+ +++   +   SW  +RS   V  
Sbjct: 34  NMEELFGEVMVPTEEVVEIRGGQRRKSERKFFPGYVLVQMV--MNDASWHLVRSVPRVMG 91

Query: 79  LVTFGTE-PAKISNDLVLAL--QAAQQSEAAPVERAFTPGQRVQLVEGALSGIEGIFLEA 135
            +   ++ PA IS+  V A+  +  Q  +    +  F PG+ V++ +G  +   G+  E 
Sbjct: 92  FIGGTSDRPAPISDKEVDAIMNRLQQVGDKPRPKTLFEPGEMVRVNDGPFADFNGVVEEV 151

Query: 136 DGER-RVMVLIEMLSKPVSV 154
           D E+ R+ V + +  +   V
Sbjct: 152 DYEKSRLKVSVSIFGRATPV 171