Pairwise Alignments

Query, 402 a.a., hemolysin D from Herbaspirillum seropedicae SmR1

Subject, 379 a.a., RND family efflux transporter, MFP subunit from Enterobacter asburiae PDN3

 Score =  361 bits (926), Expect = e-104
 Identities = 200/372 (53%), Positives = 255/372 (68%), Gaps = 11/372 (2%)

Query: 5   SRFTRLTMT--VAIAAALVAC-GQKPAAQGGPMPPSEVSVVTIAPQRVAITNELPGRVEA 61
           + F RL ++  +  A  L  C GQ+   Q    P   V +V  AP  +A+T ELPGR +A
Sbjct: 3   NHFRRLPLSGFIVCAVLLTGCDGQENQQQHLQAPQVSVHIVKSAP--LAVTTELPGRTDA 60

Query: 62  FRVAQVRARVAGIVQKRVFKEGSEVKEGQVLFKIDPAQYKASLESAQATLARAQANLTQT 121
           FRVA+VR +V+GI+ +R F EGS+VK G+ L++IDPA Y+A+ +SA+  LA+AQA     
Sbjct: 61  FRVAEVRPQVSGIILRRNFAEGSDVKAGESLYQIDPATYQAAYDSAKGELAKAQAAANIA 120

Query: 122 TLTAQRYKPLVEVNAVSKQEYDNAVAAQKQAEADVAAGKAAVQTASLNLGYATVTSPISG 181
            LT +RY PLV    VSKQEYD AVA  +QAEA V A KA V++A +NL Y  VTSP+ G
Sbjct: 121 HLTVKRYLPLVGTQYVSKQEYDQAVATAQQAEASVVAAKAGVESARINLAYTKVTSPVDG 180

Query: 182 RIGRALVTEGALVGQGDATQLALVQQLDPVYVNVTQSSADLLKLQQAMAAGQLKSVGDNK 241
           RIG++ VTEGALV  G A  LA VQQLDP+YV+VTQSS D ++L+Q          GD  
Sbjct: 181 RIGKSSVTEGALVTNGQAAALATVQQLDPIYVDVTQSSNDFMRLKQTSL-----QKGDTA 235

Query: 242 ASVTLELENGQAYPLPGKLLFSDISVDENTGSVSLRAEFPNPKRLLLPGTYVRAKIEQAV 301
           +SV L +ENGQ YPL G L FSD++VDE+TGS++LRA FPNP+ LLLPG +VRA+I++  
Sbjct: 236 SSVELLMENGQPYPLKGTLQFSDVTVDESTGSITLRAIFPNPQHLLLPGMFVRARIDEGT 295

Query: 302 DEQALLVPQQAVVR-DAGGSTVMVVNAENKVEPRPVKTGGARGNNWQVLDGLKEGDRVIV 360
              A+LVPQQ V R   G +TV+VVN +N+VEPR V    A G+ W V +GLK GDRVIV
Sbjct: 296 QPDAILVPQQGVTRTPRGDATVLVVNDKNQVEPRTVVAPQAIGDRWLVTEGLKNGDRVIV 355

Query: 361 EGLQKVRPGATV 372
            GLQKVRPG TV
Sbjct: 356 SGLQKVRPGVTV 367