Pairwise Alignments

Query, 402 a.a., hemolysin D from Herbaspirillum seropedicae SmR1

Subject, 385 a.a., Multidrug export protein AcrE from Escherichia fergusonii Becca

 Score =  347 bits (891), Expect = e-100
 Identities = 192/385 (49%), Positives = 263/385 (68%), Gaps = 10/385 (2%)

Query: 1   MSSVSRFTRLTMTVAIAAALVA-C---GQKPAAQGGPMPPSEVSVVTIAPQRVAITNELP 56
           M+  +RF  L   + I+AAL+A C   G++ A  G P     V +V  AP  + +  ELP
Sbjct: 1   MTKHARFFLLPSFILISAALIAGCNDKGEEKAHVGEPQVT--VHIVKTAP--LEVKTELP 56

Query: 57  GRVEAFRVAQVRARVAGIVQKRVFKEGSEVKEGQVLFKIDPAQYKASLESAQATLARAQA 116
           GR  A+R+A+VR +V+GIV  R F EGS+V+ GQ L++IDPA Y+AS +SA+  LA+++A
Sbjct: 57  GRTNAYRIAEVRPQVSGIVLNRNFTEGSDVQAGQSLYQIDPATYQASYDSAKGELAKSEA 116

Query: 117 NLTQTTLTAQRYKPLVEVNAVSKQEYDNAVAAQKQAEADVAAGKAAVQTASLNLGYATVT 176
                 LT +RY PLV    +S+QEYD A+A  +QA+A V A KA V++A +NL Y  VT
Sbjct: 117 AAAIAHLTVKRYVPLVGTKYISQQEYDQAIADARQADATVIAAKATVESARINLAYTKVT 176

Query: 177 SPISGRIGRALVTEGALVGQGDATQLALVQQLDPVYVNVTQSSADLLKLQQAMAAGQLKS 236
           +PISGRIG++ VTEGALV  G  T+LA VQQLDP+YV+VTQSS D ++L+Q++  G L  
Sbjct: 177 APISGRIGKSTVTEGALVTNGQTTELATVQQLDPIYVDVTQSSNDFMRLKQSVEQGNLHK 236

Query: 237 VGDNKASVTLELENGQAYPLPGKLLFSDISVDENTGSVSLRAEFPNPKRLLLPGTYVRAK 296
             +  ++V L +ENGQ YPL G L FSD++VDE+TGS++LRA FPNP+  LLPG +VRA+
Sbjct: 237 -ENATSNVELVMENGQTYPLKGTLQFSDVTVDESTGSITLRAVFPNPQHTLLPGMFVRAR 295

Query: 297 IEQAVDEQALLVPQQAVVR-DAGGSTVMVVNAENKVEPRPVKTGGARGNNWQVLDGLKEG 355
           I++ V   A+L+PQQ V R   G +TV++VN +++VE RPV    A G+ W + +GLK G
Sbjct: 296 IDEGVQPDAILIPQQGVSRTPRGDATVLIVNNKSQVEARPVVASQAIGDKWLISEGLKSG 355

Query: 356 DRVIVEGLQKVRPGATVKPVQWNPA 380
           D+VIV GLQK RPG  VK     PA
Sbjct: 356 DQVIVSGLQKARPGEQVKATTDTPA 380