Pairwise Alignments

Query, 460 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Herbaspirillum seropedicae SmR1

Subject, 461 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  561 bits (1446), Expect = e-164
 Identities = 298/473 (63%), Positives = 342/473 (72%), Gaps = 28/473 (5%)

Query: 1   MHIHILGICGTFMGGLAVLAKEAGHTVTGCDANVYPPMSTQLEAQGITLTQGFDAAQVEL 60
           MHIHILGICGTFMGG+A LA+EAGH VTGCDA VYPPMS QL A GI L +GF A Q+ L
Sbjct: 1   MHIHILGICGTFMGGVAALAREAGHRVTGCDAGVYPPMSDQLRALGIDLIEGFGADQLAL 60

Query: 61  EPDLFVIGNVVSRGN--------PLMEEILNRGLPYVSGPQWMGENILQDKWVLAVAGTH 112
            PD+FV+GNVVSR          PLME I++ G  Y SGPQW+ E++LQ + V+AVAGTH
Sbjct: 61  RPDMFVVGNVVSRARLADGTPKFPLMEAIMDSGAAYTSGPQWLAEHVLQGRHVMAVAGTH 120

Query: 113 GKTTTSAMLAWVLEHAGYQPGFLIGGVPMNFGVSARLGSDGQGGPAPFFVIEADEYDTAF 172
           GKTTT+ ML W+LE  G QPGFLIGGVPMNFGVSARLG  GQ      F IEADEYDTAF
Sbjct: 121 GKTTTTGMLTWILEANGLQPGFLIGGVPMNFGVSARLGQ-GQT-----FTIEADEYDTAF 174

Query: 173 FDKRSKFVHYRTRTAVLNNLEYDHADIFPDLAAIETQFHHLVRTVPGIGRLIVNGREPAL 232
           FDKRSKFVHYR RTA+LNNLE+DHADIF DLAAIE QFHHL+RTVPG GR++VNG E +L
Sbjct: 175 FDKRSKFVHYRPRTAILNNLEFDHADIFDDLAAIERQFHHLIRTVPGNGRVVVNGLEESL 234

Query: 233 QRVLARGCWSEREDFGVAQGQSGWSLLTHEDGRFDVFFDGQTQGTVEWQLTGEHNRMNAL 292
           +RVL +G WSE   FG A           E   FDV   GQ  G VEW LTG HN++N L
Sbjct: 235 ERVLHKGLWSELRSFGAAVSD---FTAQGEPHAFDVLHQGQPAGRVEWALTGVHNQLNGL 291

Query: 293 AAIAAARHVGVPVAQAIAALGAFQSVKRRMELRG----SANGVAVYDDFAHHPTAIATTV 348
           AAIAAA HVGV  A A  AL  F++V+RRME+RG    +   + VYDDFAHHPTAI TT+
Sbjct: 292 AAIAAAEHVGVAPADAARALSNFENVRRRMEVRGTVPRAGGAITVYDDFAHHPTAIRTTL 351

Query: 349 AGLRKKVG--AARILAVLEPRSNTMKLGTMKQALPGSLADADLVFGFGAHTGRDALGWDL 406
            GL++K+G    RILAV EPRSNTMKLGTMK  LP SL  ADL F    H+G   L WD 
Sbjct: 352 DGLQRKLGQPRGRILAVFEPRSNTMKLGTMKSQLPWSLEAADLAF---CHSG--GLDWDA 406

Query: 407 GEALAPLGAKAAAFDDLAALVQAVKAAARPGDHVLVMSNGGFGGVHQKLLDAL 459
            EALAP+GA+A    ++  LV  V AAA+ GDH++ MSNGGFGGVH +LL AL
Sbjct: 407 AEALAPMGARAQVGRNIDELVAQVTAAAQAGDHIVCMSNGGFGGVHDRLLKAL 459