Pairwise Alignments

Query, 460 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Herbaspirillum seropedicae SmR1

Subject, 482 a.a., UDP-N-acetylmuramate--L-alanine ligase from Acinetobacter radioresistens SK82

 Score =  139 bits (349), Expect = 3e-37
 Identities = 104/372 (27%), Positives = 175/372 (47%), Gaps = 25/372 (6%)

Query: 3   IHILGICGTFMGGLAVLAKEAGHTVTGCDANVYPPMSTQLEAQGITLTQGFDAAQVELEP 62
           IH +GI G  M G+A + K  G+ V+G D       + QLE  GI +  G  A  ++   
Sbjct: 25  IHFVGIGGAGMCGIAEVLKNQGYCVSGSDIKA-SKTTAQLEENGIEVFIGHAADNIK-NA 82

Query: 63  DLFVIGNVVSRGNPLMEEILNRGLPYVSGPQWMGENILQDKWVLAVAGTHGKTTTSAMLA 122
            + V+   +   NP ++  + + +P V   + +GE +++ +  +AVAGTHGKTTT+++L 
Sbjct: 83  SVLVVSTAIDPENPEVKAAIEQRIPVVRRAEMLGE-LMRYRHGIAVAGTHGKTTTTSLLT 141

Query: 123 WVLEHAGYQPGFLIGGVPMNFGVSARLGSDGQGGPAPFFVIEADEYDTAFFDKRSKFVHY 182
            +L   G  P ++IGG+    GV+A LG+      + + V EADE D       + F+H 
Sbjct: 142 CMLAEEGMDPTYVIGGLLNRTGVNAALGA------SRYIVAEADESD-------ASFLHL 188

Query: 183 RTRTAVLNNLEYDHADIF-PDLAAIETQFHHLVRTVPGIGRLIVNGREPALQRVLARGCW 241
               A++ N++ DH D +      ++  F   +  +P  G  +V G +  ++ ++ R   
Sbjct: 189 EPMAAIVTNIDADHMDTYGGSFDVLKDTFIQFLHKLPFYGLAVVCGDDANIREIMPR-IA 247

Query: 242 SEREDFGVAQGQSGWSLLTHEDG---RFDVFFDGQTQGTVEWQLTGEHNRMNALAAIAAA 298
                +G        ++   +DG    F V    +    +     G HN +NALAAI  A
Sbjct: 248 RPLLTYGFNPDNDIRAVDVEQDGMRSHFTVLRKDREPLRLTINQPGLHNVLNALAAIGVA 307

Query: 299 RHVGVPVAQAIAALGAFQSVKRRMELRG----SANGVAVYDDFAHHPTAIATTVAGLRKK 354
              GV  A    AL  F  V RR +++G        V + DD+ HHP  +  T+   R+ 
Sbjct: 308 TDEGVSDAAIGRALEGFSGVGRRFQVQGEFGLEQGTVKLVDDYGHHPKEVEATIKAARQS 367

Query: 355 VGAARILAVLEP 366
               R++ + +P
Sbjct: 368 HPDRRLVMMFQP 379