Pairwise Alignments

Query, 273 a.a., sulfonate ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 263 a.a., putative transport system permease protein (VIMSS) from Escherichia coli BW25113

 Score =  173 bits (439), Expect = 3e-48
 Identities = 93/254 (36%), Positives = 146/254 (57%), Gaps = 17/254 (6%)

Query: 15  VPIIVIALWEGASRAGWINPQILPSPWAVLRKWVEYATPLKPYDPEAGSWLAWAFSGELV 74
           +P+ ++A+W+ AS  GW++ +ILPSP  V+  +                W   A SGEL 
Sbjct: 17  LPVGIVAVWQLASSVGWLSTRILPSPEGVVTAF----------------WTLSA-SGELW 59

Query: 75  MDAIGSLYRVVAGFLIGAGLALPLGLLMGSSQRIYGLMNLTVQVIRPIPPIAYIPLAILW 134
                S +R + GF IG  L L LGL+ G S+    L++ ++Q++R +P +A IPL ILW
Sbjct: 60  QHLAISSWRALIGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILW 119

Query: 135 FGLGNPPALFLISLGAFFPVLMNTIAGVRQVDSIYLRAARNLGASQSTLFLRVMLPAAVP 194
           FG+     +FL++LG  FP+ +NT  G+R +D   +  AR+ G S   LF+ V+LP A+P
Sbjct: 120 FGIDESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALP 179

Query: 195 YILSGVRIGIGTAFIVVIVAEMIAVSNGLGFRIMEAREYFWSDKIIAGMITIGLLGLAID 254
            I+ GVR  +G  ++ +IVAE I+ ++G+G+  M ARE+  +D ++  +I   LLG   D
Sbjct: 180 SIMVGVRFALGLMWLTLIVAETISANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLAD 239

Query: 255 LGMSRLNNYMLRWH 268
           +    L    LRW+
Sbjct: 240 VSAQLLERLWLRWN 253