Pairwise Alignments

Query, 388 a.a., tail fiber protein from Herbaspirillum seropedicae SmR1

Subject, 371 a.a., Phage baseplate from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  288 bits (736), Expect = 2e-82
 Identities = 169/388 (43%), Positives = 230/388 (59%), Gaps = 26/388 (6%)

Query: 8   LPEPQFILRDPEGLTRELVRQFEALTGKTLYPAQVERLLVNVIAYRESLVREAIQDAAKL 67
           + EP FI RDP  +T E++ Q+E  +GK LYPAQ ERLL+++ AYRE+LVR AIQ+AAK 
Sbjct: 3   IAEPDFIDRDPAQITSEMIAQYEEASGKKLYPAQAERLLIDLFAYRENLVRIAIQEAAKQ 62

Query: 68  NLVRYSRAPVLDYLGENIGVTRLPAARAGCRLRFRFDPPPATAQTLEAGVVVQGG----- 122
           NLV YSRAP+LDYLGE +GV RLPA  A   L+F      +  Q  ++ +V+  G     
Sbjct: 63  NLVAYSRAPMLDYLGELVGVHRLPAQAAKTTLQF------SVTQAAKSNLVIPQGTRASA 116

Query: 123 --AVQFATCAEQRVAAGARSIEVQALCLEAGGQGNGFLPGQINTLVSPTGALAVAEVSNL 180
             +V FAT  +  + AG+ S+ V A C+  G  GN + P QI+ LV   G   ++ V+NL
Sbjct: 117 SDSVMFATDEDVLLPAGSLSVAVTATCVVTGEPGNNWQPAQISALVDRVGNYDIS-VTNL 175

Query: 181 DTTQGGAEEEDDEHLRQRIVLAPEQFSNAASVGAYRYHVLSSHPDVIDVAVLGAQMEVRN 240
             + GG  EE+D+ LR+RI LAPE FSNA S GAYR+H LS    +IDVAVLG       
Sbjct: 176 TASSGGCGEENDDALRKRIQLAPESFSNAGSYGAYRFHTLSVSQSIIDVAVLGPD----- 230

Query: 241 GQLVSTNGIPPGVVLLHPLTRQGLPGEQVKAAVLAACNADKVRPLTDHVQVRDPQPVDFA 300
                  G+  G V L+PLT  GLPG ++ A +    + +K RPLTD V  +    V + 
Sbjct: 231 ------EGLAEGCVELYPLTLNGLPGPELLAQIEREVSKEKKRPLTDKVSAKCSPRVAYQ 284

Query: 301 LRAELTLYTSADAAATLQRAQEAAEALRDRLQSRLGSDVVCSQLVQALHVAGVYSVKLLA 360
           + A LTL+T+AD   TL  A+EA        Q+RLG D+V +Q+++ L V GVY V L  
Sbjct: 285 ISARLTLFTTADQETTLAAAREAINTWTRSRQTRLGQDIVPNQIIKVLQVDGVYDVALDM 344

Query: 361 PTTDLVLGPAQWPRCTGVSLRHSGSAEG 388
           P    VL   +W  CT + +  +G ++G
Sbjct: 345 PAKK-VLQAHEWAECTAIDVTIAGVSDG 371