Pairwise Alignments

Query, 374 a.a., tail fiber protein from Herbaspirillum seropedicae SmR1

Subject, 326 a.a., Pyocin R2_PP, baseplate/tail fiber protein from Pseudomonas putida KT2440

 Score = 72.4 bits (176), Expect = 2e-17
 Identities = 63/215 (29%), Positives = 93/215 (43%), Gaps = 44/215 (20%)

Query: 193 ESDEQFKERIVLAPEQFSNAGSVGAYHFHARSAHPEVIDVAVVSPSPGVVHLHPLVKDGL 252
           E DE  + R  L+ E  S AGS GAY +H  SA  E+ +V+V SP      L P V+  L
Sbjct: 111 EGDEALRYRTRLSLEALSVAGSSGAYEYHGLSASAELTNVSVDSPRFVEAELTPEVRAQL 170

Query: 253 PSAAVK-----------------------------------AAVLAACNSDRVRPLTDEV 277
           P+ A+                                    A V AA +++ VRP+TD  
Sbjct: 171 PAGAIVVVCDYDAGLANPLPGDVSLAILPSLSSTTPVAQLVAKVKAALSAEEVRPITDRP 230

Query: 278 KVLDPVVVDYAITARLTLLAGADAGVAVAEAR---KAAEQLRQRLQSGLGRDVVRDELIS 334
           +V   V  ++ + A L +  G D  V  A AR    AA    +RLQ  L    +     +
Sbjct: 231 RVAAGVPTEFKVEAELQIEEGPDPDVVKATARAGLNAAIAEARRLQGQLPLSAI----YA 286

Query: 335 AMKVYGVYSVGL--VGEDIVLEEHHWPRCTGIHIS 367
           A+ V G+ SV L      +V ++ H+P CT + ++
Sbjct: 287 ALHVTGIRSVTLKHPAAGVVCDKRHYPSCTSVTLT 321