Pairwise Alignments

Query, 425 a.a., hypothetical protein from Herbaspirillum seropedicae SmR1

Subject, 428 a.a., putative membrane protein from Alteromonas macleodii MIT1002

 Score =  353 bits (905), Expect = e-102
 Identities = 172/424 (40%), Positives = 263/424 (62%), Gaps = 7/424 (1%)

Query: 2   DKQDALRRTKRLAFICLLAAAALFIIASLAPPS-------WWSGLLRAMAEAAMVGALAD 54
           DK   L + KRLA  CL+ AA++F++  L P         WW GL++  +EAA++G LAD
Sbjct: 3   DKYTQLNKAKRLALACLIFAASVFVLTVLLPKFYPNLQGVWWLGLIKMASEAALIGGLAD 62

Query: 55  WFAVSALFRRIPLPLLSRHTDIIARNKERIAHNLAVFVEEKFLSPQSLAALIRRHDPAQH 114
           WFAV+ALF+ IP      HT+I+A NK  IA+NL++FV+EKF  P+++  LIR  DPA+ 
Sbjct: 63  WFAVTALFKPIPAKYPIPHTNIVASNKSVIANNLSLFVKEKFFHPEAIEKLIRDSDPAKG 122

Query: 115 LARWMALPENAARLGGYMARAVGGVLMLTDDRRIQSFLRQGLHAAVGKLDLSHSLAAVLD 174
             RW++   NA RL  ++  A  GVL + DD+ +++F+ +     + +LDL   +A  L 
Sbjct: 123 AGRWLSQDRNATRLSRFLCDAFAGVLRVLDDKPVKAFIAKTAQKGINQLDLRQLMATSLS 182

Query: 175 TLTLDGRHQQLLDRAIIELAALLNREQTRIFIAERMVDWLRQEYPKIEKILPSQWIGEKS 234
            +T + +HQ +LDR + +LA+LL   +T+I+IA+ +V WL+ EY +IEK+LPS W+ E+ 
Sbjct: 183 AVTKERQHQVVLDRVLGKLASLLAEPETQIYIADTLVVWLKTEYSRIEKLLPSSWLSEQG 242

Query: 235 AQTLADILDKLLSGIAEDPQHSLRRAFDEQVARFIVRLKEDPALRERADTFKRELLEGEA 294
           A      +  +L  + ED  H +R AFDEQV  F+  L+  P + ++ ++++ +++   A
Sbjct: 243 ALIAVKAVSSILEDVYEDEHHPIRHAFDEQVHEFLYELQHSPLMEKKVNSYREKIINDPA 302

Query: 295 VHAYVGGLWDSLRQWLRADLERSDSVLRRHAQDATQWIGQALQDDAALRASLNTHLEHAI 354
           ++AYV   W    QWL   LE+ +             +G  L  D+ L  + N H+  A 
Sbjct: 303 LNAYVQQSWAKFHQWLLTSLEQQNGKAETKVSSLLNDLGTTLTQDSELAKAFNKHIGEAA 362

Query: 355 ASLSPELAQLLSRHISDTIRQWETVELSRQVELNIGRDLQFIRINGTLVGALIGAVLFGL 414
             ++P+LA+ L+RHI DTI  W+  E++ QVELNIGRDLQ +RINGT+VG LIGA+LFG+
Sbjct: 363 KYMAPDLAEFLTRHIRDTINSWDEREMAEQVELNIGRDLQKVRINGTIVGGLIGAILFGI 422

Query: 415 SALM 418
            AL+
Sbjct: 423 EALL 426