Pairwise Alignments

Query, 251 a.a., flagellar biosynthesis protein FlgF from Erwinia amylovora T8

Subject, 262 a.a., flagellar basal-body rod protein FlgG (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  107 bits (267), Expect = 2e-28
 Identities = 83/265 (31%), Positives = 129/265 (48%), Gaps = 24/265 (9%)

Query: 5   IYTAMGAASQTLDQQ----AVTASNLANASTPGFRAQ-----------LNAARAVPVEGL 49
           ++ A+  +   LD Q    +V ++N+ANAST G++             +N A  +     
Sbjct: 1   MHPALWISKTGLDAQQTDISVISNNVANASTVGYKKSRAVFEDLLYQTVNQAGGISASNT 60

Query: 50  SLPTRTLVTASTPGAD----MSQGALDYTERALDVAMQGDGWLAVQTADGSEAYTRNGNM 105
            LP    + A T         +QG +  T+ +LD+ ++G G+  +Q  DG+ AYTRNG  
Sbjct: 61  KLPNGLNIGAGTKVVATQKMFTQGNMLTTDNSLDLMIEGPGFFEIQLPDGTTAYTRNGQF 120

Query: 106 QVSPTGQLSVQGNAVMGDGGPIAIPQGA-QITIAADGSITALNPGDAPNATV-QLGKLKL 163
            +  TGQ+   G+  +    PI IP+ A  IT++A+G ++   PG A N  V QL     
Sbjct: 121 TLDDTGQIVTPGSGYVLQ-PPITIPEDATSITVSAEGEVSVKTPGAAENQVVGQLSMTDF 179

Query: 164 VKAVGNELTRGDDGMFRVSASAQAQRGATLPLDPTMKVMPGVLEGSNVKATQTMVDMIAN 223
           +   G +   G +      AS    +G T  LD    +  G LE SNV  T+ +V++I +
Sbjct: 180 INPSGLD-PMGQNLYTETGASGTPIQG-TASLDGMGAIRQGALETSNVNVTEELVNLIES 237

Query: 224 ARRFEMQMKVISSVDENEQKANQLL 248
            R +EM  KVIS+VD+     NQ L
Sbjct: 238 QRIYEMNSKVISAVDQMLAYVNQNL 262