Pairwise Alignments

Query, 312 a.a., HTH-type transcriptional regulator MetR from Erwinia amylovora T8

Subject, 299 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  224 bits (572), Expect = 1e-63
 Identities = 122/274 (44%), Positives = 170/274 (62%), Gaps = 6/274 (2%)

Query: 1   MIELKHLRTLQALQNTGSLAAAAAQLHQTQSALSHQFSDLEQRLGFRLFVRKSQPLRFTP 60
           MIEL+HLRTL AL+ +GSLA AA +   TQSALSHQ  +LE R+   +FVRKS+PL FT 
Sbjct: 1   MIELRHLRTLVALKESGSLAGAAKKRFVTQSALSHQIKELETRINSAIFVRKSKPLSFTQ 60

Query: 61  QGEVLLQLAEQVLPQIQQA---LQACHEPHQTTLRIAIECHSCIQWLTPALNEFRQSWPQ 117
           +G  LL LAE++LP++ +    L+         L + IECHSC +WL P + +F  S+P 
Sbjct: 61  EGARLLNLAEEILPKVIETEIDLKNGLGSEARDLFVGIECHSCFRWLMPVIEQFNASFPH 120

Query: 118 VVMDFKSGVTFDPQPALQQGELDVVLTSDILPRSGLFYSPMFDFEVRLVLAPNHPLAQKT 177
             ++  S   FD   AL+QG+LDVVLTSD +P   + Y  +FDFEV+L++A +HPLA+  
Sbjct: 121 TNLELSSRHLFDSLTALKQGQLDVVLTSDPIPDHDIAYQHLFDFEVKLLVAADHPLAELP 180

Query: 178 VISPQDLASEVLMIYPVQRQRLDIWRHFLQPAGVSPALKSV--DNTLLLIQMVSAGMGIA 235
            ++   L  + L+ YPV   RLDI+RHF++PAGV P  K +  D T +L+Q ++   G+A
Sbjct: 181 YVTAAQLKDQTLLTYPVPLDRLDIYRHFMEPAGV-PVAKQIRCDLTAMLLQRIACKDGVA 239

Query: 236 ALPHWVVESFEHQGLVVTKALGDGLWSRLYAAVR 269
           ALP W +       L   K   +GL   L+ A R
Sbjct: 240 ALPSWSINEAHGLSLKAVKLGSEGLRRPLFGAYR 273