Pairwise Alignments

Query, 941 a.a., excinuclease ABC subunit UvrA from Erwinia tracheiphila SCR3

Subject, 942 a.a., excinuclease ABC, A subunit (RefSeq) from Shewanella amazonensis SB2B

 Score = 1519 bits (3932), Expect = 0.0
 Identities = 739/941 (78%), Positives = 841/941 (89%)

Query: 1   MDKIEVRGARTHNLKNINLIIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60
           MDKIE+RGARTHNLKNINL IPRDKLIV+TGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
Sbjct: 1   MDKIEIRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60

Query: 61  ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120
           ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITE++DYLRLLFARVGEPRC
Sbjct: 61  ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLFARVGEPRC 120

Query: 121 PEHDVTLAAQTVSQMVDNVLALTEGRRLMLLAPIIKERKGEHSKTLENLASQGYIRARID 180
           P H   LAAQTVSQMVD VL   EG +LMLLAP++K RKGEH K L++L++QGYIRARID
Sbjct: 121 PTHGQPLAAQTVSQMVDKVLERPEGEKLMLLAPVVKARKGEHVKLLDSLSAQGYIRARID 180

Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLQQRLAESFETALELSGGTVVVADMDDT 240
           GEVCDLSDPP L+L  KHTIEVVVDRFKV+DD+QQRLAESFET LELSGG  VVA M++ 
Sbjct: 181 GEVCDLSDPPTLDLHVKHTIEVVVDRFKVKDDMQQRLAESFETTLELSGGIAVVASMEEG 240

Query: 241 SAEELVFSANFACPVCGYSMSELEPRLFSFNNPAGACATCDGLGVQQYFDPERVVQNPDL 300
           +AEE++FSANFACP CGYSM+ELEPR+FSFNNPAGAC TCDGLGVQQ+FDPERV+ + +L
Sbjct: 241 AAEEMIFSANFACPHCGYSMAELEPRIFSFNNPAGACQTCDGLGVQQFFDPERVIVSGEL 300

Query: 301 SLAGGAIRGWDRRNFYYFQMLCSLSEHLNFDIETPFISLDASTRKVILYGSGKENIEFKY 360
           SLAGGA+RGWDRRNFYYFQML SL+EH  FD+E PF  L A  +K++LYGSGKE + F+Y
Sbjct: 301 SLAGGAVRGWDRRNFYYFQMLKSLAEHYEFDVEAPFSELTAKVQKIVLYGSGKEEVAFRY 360

Query: 361 INDRGDTSVRRHPFEGVLHNMERRYKETESAAVREDLAKFISNRACASCEGTRLRREARH 420
           +NDRGD  VR+HPFEG+L+NM+RRY+ETES  VRE+LAK+ISN+AC+SC G+RLR EARH
Sbjct: 361 VNDRGDVVVRKHPFEGILNNMDRRYRETESNTVREELAKYISNQACSSCGGSRLREEARH 420

Query: 421 VFVENTNLPTISDMSIGHAMTFFQEMKLSGQRAKIAEKVLKEIGDRLKFLVNVGLNYLSL 480
           VF+E+ NLPT++  SIG AM +F +++  GQ+A+IAEK+LKE+ DRL FLVNVGLNYLSL
Sbjct: 421 VFIEDLNLPTLTHWSIGEAMDYFNKLEFEGQKAQIAEKILKEVRDRLGFLVNVGLNYLSL 480

Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLETLVHLRNLGNT 540
           +RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL TL HLR+LGNT
Sbjct: 481 ARSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLTHLRDLGNT 540

Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVRGGQVVAEGTVDDIMAVDASLTGQFLSGKRSIAV 600
           VIVVEHDEDAIR ADH+IDIGPGAGV GG+V+ +G +  I A + S+TGQ++SGKR I V
Sbjct: 541 VIVVEHDEDAIRMADHIIDIGPGAGVHGGEVICDGDLAAITACEHSVTGQYISGKRKIQV 600

Query: 601 PQERVKAAPNKVLKLTGAKGNNLKDVTLTLPVGLFSCITGVSGSGKSTLINDTLFPIAQR 660
              R    P ++++L GA+GNNLK+V L++PVGLF+C+TGVSGSGKSTLINDT F IA +
Sbjct: 601 DGGRTPINPEQLIELRGARGNNLKNVDLSIPVGLFTCVTGVSGSGKSTLINDTFFKIAHK 660

Query: 661 LLNGATIIEPAPYRDISGMEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPVRELFSGVPE 720
            LNGAT+ EPAPY  I+G+E  DKV+DIDQSPIGRTPRSNPATYTGIFTP+RELF+G  E
Sbjct: 661 ALNGATVDEPAPYTSITGLEQCDKVVDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQE 720

Query: 721 SRTRGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780
           SRTRGY  GRFSFNV+GGRCEACQGDG+IKVEMHFLPD+YVPCD CKGKRYNRETLE+KY
Sbjct: 721 SRTRGYQVGRFSFNVKGGRCEACQGDGLIKVEMHFLPDVYVPCDSCKGKRYNRETLEVKY 780

Query: 781 KGKSIHEVLEMTIEEAREFFDAVPALARKLQTMMDVGLSYIRLGQSATTLSGGEAQRVKL 840
           KGK+IHEVL+MT+E+AR FFDAVPA+ARKLQT+MDVGLSYIRLGQSATTLSGGEAQRVKL
Sbjct: 781 KGKNIHEVLQMTVEDARTFFDAVPAIARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKL 840

Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLEVLHQLRDQGNTIVVIEHNLDVIKTADW 900
           A+ELSKR TG+TLYILDEPTTGLHFADIQ LL+VLH+L+  GNTIVVIEHNLDVIKTADW
Sbjct: 841 AKELSKRDTGKTLYILDEPTTGLHFADIQLLLDVLHRLKSHGNTIVVIEHNLDVIKTADW 900

Query: 901 IVDLGPEGGSGGGEILASGTPETVAKCKASHTARFLKPLLK 941
           IVDLGPEGGSGGG IL +GTPE VA+   SHTARFLKPLL+
Sbjct: 901 IVDLGPEGGSGGGTILVAGTPEDVAEHPTSHTARFLKPLLQ 941